Mannheimia succiniciproducens: MS1048
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Entry
MS1048 CDS
T00201
Symbol
xthA
Name
(GenBank) XthA protein
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
msu
Mannheimia succiniciproducens
Pathway
msu03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
msu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
MS1048 (xthA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
msu03400
]
MS1048 (xthA)
Enzymes [BR:
msu01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
MS1048 (xthA)
DNA repair and recombination proteins [BR:
msu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
MS1048 (xthA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
Exo_endo_phos_3
Exo_endo_phos_2
NKWYS
Motif
Other DBs
NCBI-ProteinID:
AAU37655
UniProt:
Q65TQ5
LinkDB
All DBs
Position
1031811..1032638
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AA seq
275 aa
AA seq
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MYFINRNNMKIISFNINGLRARPHQLDKIVEQYQPDIIGLQEIKVADEMFPHELVDHLGY
HVYHHGQKGHYGVALLCKQAPKAVHKGFSTDTEDAQKRLIMADFETAFGALTVVNGYFPQ
GESRDHETKFPAKEKFYADLLNYVKNEHNPESNIIIMGDMNISPTDLDIGIGEDSRKRWL
RTGKCSFLPEEREWYQRLYECGLEDTFRKLNPWTNDKFSWFDYRSKGFAENRGLRIDHIL
ANSKLAERCVDTGIALDIRAMEKPSDHAPIWATFK
NT seq
828 nt
NT seq
+upstream
nt +downstream
nt
atgtattttataaataggaataatatgaaaataatttcttttaatattaatggattaaga
gcccgccctcatcaattggataaaattgtcgagcagtatcaaccggatattatcggtttg
caggaaattaaagttgccgatgaaatgttccctcatgagctggtggatcatctcggttat
catgtttatcatcacggacaaaaagggcattatggtgtagcattattgtgtaaacaagca
ccgaaagcggtacacaaaggattttctaccgatacggaagatgcgcaaaagcgtttgatt
atggcggattttgagactgcttttggcgcgttaactgtggtaaacggttatttcccgcaa
ggcgagagccgcgatcatgaaacgaaatttccggctaaagaaaaattttatgcggattta
ttgaattacgttaaaaacgagcataatccggaaagtaatattattatcatgggcgatatg
aacatcagtccgacggatttagatatcggtatcggcgaagacagccgcaaacgttggtta
agaaccggcaaatgctcatttttaccggaagagagagaatggtaccagcgtttatatgaa
tgcggattagaagatacctttcgtaaattgaatccttggacgaatgacaaattctcctgg
ttcgattatcgctccaaaggatttgccgaaaaccgcggattgcgtatcgaccatatttta
gccaattcaaaattagcggaacgctgcgtagatacgggaattgcgttggatattcgggcg
atggaaaaaccttccgatcacgcacctatttgggcaacatttaaatag
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