Mannheimia succiniciproducens: MS1358
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Entry
MS1358 CDS
T00201
Symbol
caiC
Name
(GenBank) CaiC protein
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
msu
Mannheimia succiniciproducens
Pathway
msu00061
Fatty acid biosynthesis
msu00071
Fatty acid degradation
msu01100
Metabolic pathways
msu01212
Fatty acid metabolism
msu02024
Quorum sensing
msu04146
Peroxisome
Module
msu_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
msu00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
MS1358 (caiC)
00071 Fatty acid degradation
MS1358 (caiC)
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
MS1358 (caiC)
09145 Cellular community - prokaryotes
02024 Quorum sensing
MS1358 (caiC)
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
msu01004
]
MS1358 (caiC)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
msu04147
]
MS1358 (caiC)
Enzymes [BR:
msu01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
MS1358 (caiC)
Lipid biosynthesis proteins [BR:
msu01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
MS1358 (caiC)
Exosome [BR:
msu04147
]
Exosomal proteins
Exosomal proteins of breast milk
MS1358 (caiC)
Exosomal proteins of breast cancer cells
MS1358 (caiC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
AMP-binding_C_2
Motif
Other DBs
NCBI-ProteinID:
AAU37965
UniProt:
Q65SU5
LinkDB
All DBs
Position
complement(1362357..1364045)
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AA seq
562 aa
AA seq
DB search
MEKGWFKNYPEGSPREIDTSEYHSILDMFDKAVREHPDRPAYINMGKVLTFRKLEERSRA
FAAYLQNELKLTRGERVALMMPNLLQYPIALFGVLRAGLVVVNVNPLYTPRELEHQLQDS
GAKAIVVVSNFASTVEQVVFNTDVKHVILTRMGDQLSFGKRTLVNFIVKYVKKLVPKYKL
PHAVTFREVLSVGKHRQFVRPDLARDALAFLQYTGGTTGIAKGAMLSHGNIITNVFQAKW
IAESFIGDRRRERIAIIPLPLYHVFALSVNALLFVELGITAVLITNPRDVDGMVKELRKY
PFTAITGVNTLFNALLNNENFKEVDFSSLKLSVGGGMAVQQSVAQRWHDLTGNNIIEGYG
MTECSPLIAASTILTDKHDGSIGVPVPNTDIRIMRDDGDEAELGEPGELWVKGEQVMQGY
WQRPEATAEVLKDGWMATGDIVVMDKNYIMRIVDRKKDMILVSGFNVYPNEIEDVVMLNP
KVLEVVAIGVPHEVSGETIKIFVVKKDESLTRDELRAHCRNLLTGYKVPKEIEFRDELPK
TNVGKILRRVLRDEELAKRNAQ
NT seq
1689 nt
NT seq
+upstream
nt +downstream
nt
atggaaaagggatggtttaaaaattatccggaagggagcccaagggaaattgatacgtct
gaataccacagtattttagatatgtttgataaggcggttcgggaacatccggatcgtccc
gcctatattaatatgggtaaagtattaacctttcgtaagttagaagaacgcagccgtgcc
tttgccgcatatttgcaaaatgaattaaaactgacgcgcggagaacgggtagcgttgatg
atgccgaatttattgcaatatcccattgctttattcggtgtattgagagccggtttggtg
gtggtgaatgttaatccgctttatactccccgcgaattagaacaccaattgcaggatagc
ggcgcgaaagccattgtagtggtatctaattttgcttcgactgtagagcaagttgtgttt
aacaccgatgtaaaacacgttattttgacccgaatgggcgatcagttgtctttcggtaag
cgtactttagtcaactttatcgttaaatatgtcaaaaaattagtaccaaaatataaattg
ccccatgcggtaacttttcgtgaagtattaagtgtgggcaaacaccgtcaattcgtacgc
ccggatttggcgcgcgatgcgttggcttttttgcaatacaccgggggaacaacaggcatt
gcaaaaggcgcaatgctttctcacggtaatattattacgaatgtttttcaggcaaaatgg
attgcggaaagctttataggtgatcgcagaagagaacgtattgctattattccgctgcct
ttgtatcacgtattcgctctgtcggtaaatgcgttgttgtttgtggaattagggattacc
gcggtactcattactaaccctcgtgatgtggacggcatggtaaaagagctgagaaaatat
ccgtttacggcaattaccggagtaaataccttatttaacgccttgttaaataacgagaat
tttaaagaagtggatttttcttcattaaaactttccgtaggcggcggaatggcggttcaa
caatccgttgctcaacgttggcatgacttaaccggcaataatattattgaaggttatggt
atgaccgaatgttcgccgcttattgccgcttcaacgattcttaccgacaaacatgacggc
tctataggcgtgccggtacctaataccgatattcgcattatgcgtgatgacggcgatgag
gcggaattaggcgaaccgggcgaactctgggtaaaaggcgagcaggttatgcagggttat
tggcagcgtccggaagctaccgccgaagtgttaaaagacggttggatggcaacgggtgat
attgtggtgatggataaaaattatatcatgcgcatagtggatcgtaagaaagatatgatt
ttagtttccggctttaatgtttatccgaatgaaatcgaagatgtggtgatgttgaatcca
aaagtgttagaggtggtggctattggtgtgcctcatgaagtgtcgggcgaaacgattaaa
attttcgtagtaaagaaagacgaaagtttaacccgtgacgaattacgagcccattgccgc
aacttactcacgggatataaagtgccgaaagaaattgaatttcgtgacgaattaccgaaa
accaatgtggggaaaattcttcgccgggtattgcgggatgaagaattagccaaacgtaat
gcgcaataa
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