Mannheimia succiniciproducens: MS1368
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Entry
MS1368 CDS
T00201
Symbol
uvrD
Name
(GenBank) UvrD protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
msu
Mannheimia succiniciproducens
Pathway
msu03420
Nucleotide excision repair
msu03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
msu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
MS1368 (uvrD)
03430 Mismatch repair
MS1368 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
msu03400
]
MS1368 (uvrD)
Enzymes [BR:
msu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
MS1368 (uvrD)
DNA repair and recombination proteins [BR:
msu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
MS1368 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
MS1368 (uvrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
AAA_30
Viral_helicase1
AAA_12
Motif
Other DBs
NCBI-ProteinID:
AAU37975
UniProt:
Q65ST5
LinkDB
All DBs
Position
complement(1373630..1375813)
Genome browser
AA seq
727 aa
AA seq
DB search
MMDISELLDGLNDKQREAVAAPLGNYLVLAGAGSGKTRVLTHRIAWLIAVEGISEGSIMA
VTFTNKAAAEMRQRIESTLSQHSSRRLFGMWVGTFHSIAHRLLRAHYLDANLPQDFQILD
SEDQLRLLKRLLKLHNYDEKMFPAKQACWYINNKKDDGLRPHQIDDNNDKQEREWINIYR
IYQDTCDRAGLVDFAEILLRAYELFLKKPVILQRYRQRFQQILVDEFQDTNKIQYAWIRL
LAGETGNVMIVGDDDQSIYGWRGAQVENIQRFLDDFHKAKTIRLEQNYRSTGNILQSANQ
LISNNSNRLGKDLWTEGDKGEPVGIYAAFNELDEALFVSSQIKIWWEDGGELNDCAVLYR
SNSQSRVIEEALIRAQIPYRIYGGMRFFERQEIKDALAYLRLIANRQDDAAFERVINTPT
RGIGDRTLDVLRNLTREREITLWQATQLAIGENKLAGRSATALLRFCELINSLAQETEEM
PLFAQTDFVIKHSGLYEMYKQEKGEKGEVRIENLEELVSATREFIKPDDAEDMSDLSAFL
THASLEAGEEQASPHQSCVQMMTLHSAKGLEFPRVFMVGVEEGLFPSFMSLEEPGRLEEE
RRLAYVGITRAKQKLTICYAESRRLYGKEERHIPSRFINELPQECIQAVRLRGTVTRAYN
QSAVGSVKISPLNDSGWKTGQKVKHGKFGTGTVINVEGSDNNTRLQIAFQGQGIKWLIAH
LANLEKL
NT seq
2184 nt
NT seq
+upstream
nt +downstream
nt
ttgatggatatttcagaattactcgacggattaaacgataaacaacgtgaagctgtagcg
gcgccgcttggaaattatcttgtgttggccggtgccggcagcggtaaaaccagagtgcta
acgcaccgaatcgcttggttaattgccgttgaagggatttctgaaggcagtatcatggcg
gtaacctttaccaataaagcggcggcggaaatgcgccagcgtattgaatccaccctttca
caacattcttcccgccgtttgttcggtatgtgggtgggcacttttcacagtattgcccac
cgattattgcgtgctcattatctggatgcgaatttaccgcaggatttccaaattctggac
agcgaagatcagctacgtttactgaaacgcctgcttaaactacataattacgatgaaaaa
atgtttcccgcaaaacaggcttgctggtatatcaataataaaaaagatgacggattacgc
cctcaccaaattgatgataataacgataaacaagagcgtgaatggattaatatttatcgc
atttatcaggatacctgcgatcgagccggattagtggattttgcggaaattttattgcgt
gcctacgaattattcctcaaaaaaccggtaattctgcagcgttatcggcaacgtttccag
caaattttagtagacgaatttcaggataccaacaaaattcaatatgcctggattcgattg
ctggcgggcgagaccggcaatgttatgatcgtgggtgatgacgatcaatccatttatggc
tggcgcggtgcgcaagttgaaaatattcagcgttttttagatgatttccataaagcgaaa
accattcgtttagaacaaaattatcgttctacgggcaatattctgcaatcggcaaaccag
cttatttccaataacagtaaccgtttgggaaaagatctttggaccgagggcgacaaaggc
gagcccgtcggtatttatgccgcatttaacgaattggatgaagctttgtttgtttcttct
caaattaaaatctggtgggaagacggcggcgaactcaatgattgtgcggtgttatatcgc
agtaacagtcagtcccgcgtgattgaagaggctttgattcgcgcgcaaattccttatcgg
atttatggcggtatgcggttcttcgagcgtcaggaaattaaagatgcgttggcgtatttg
cgtttgattgcgaatcggcaggatgacgccgcttttgaacgggttatcaatacgccgaca
cgcggtattggcgatcgcactttagatgtgttgcgtaatcttacccgcgagcgggaaatt
accttatggcaagccactcagttagctatcggtgaaaataaactggcaggacgttcggca
acggcattactgcgcttttgcgaattaattaattccttggcgcaggaaacggaagaaatg
cctttatttgcgcaaacggattttgtcattaagcattccggtttatatgaaatgtataaa
caggaaaaaggcgaaaaaggtgaggttcgtattgaaaacctggaagaactggtttccgca
acgcgggaattcatcaaacctgatgatgcggaagatatgtcggatctaagcgccttttta
acgcatgcatctcttgaggccggtgaagagcaggcatctcctcatcaatcctgtgtgcaa
atgatgactttgcattcggctaaaggtctggaatttccgcgggtgtttatggtcggcgta
gaagaaggcttattccctagttttatgtctttagaagaaccggggcgtttggaagaagaa
cgccgtttggcttatgtggggatcacccgagcaaaacagaaattgactatttgctatgcg
gaaagtcgccgattatacggcaaagaagagcgtcatattccgtcccgttttatcaatgaa
ttaccgcaggaatgtattcaggcggttcgtttgcggggtacggttacccgcgcttacaat
caaagtgcggtcggttctgtgaaaatttcaccgttaaacgacagcggttggaaaaccggg
caaaaagtgaaacacggcaaattcggcacgggaacggtgattaatgttgaaggctcggat
aataacacccgtttgcaaatcgcgttccaggggcaggggatcaaatggttaattgcgcat
ttggcaaatttagaaaagctttag
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