Mannheimia succiniciproducens: MS1441
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Entry
MS1441 CDS
T00201
Symbol
truB
Name
(GenBank) TruB protein
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
msu
Mannheimia succiniciproducens
Brite
KEGG Orthology (KO) [BR:
msu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
msu03016
]
MS1441 (truB)
Enzymes [BR:
msu01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
MS1441 (truB)
Transfer RNA biogenesis [BR:
msu03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
MS1441 (truB)
Prokaryotic type
MS1441 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
Motif
Other DBs
NCBI-ProteinID:
AAU38048
UniProt:
Q65SL2
LinkDB
All DBs
Position
complement(1436401..1437318)
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AA seq
305 aa
AA seq
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MSRPRKRGRDIHGVFLLDKPQGMSSNDILQKVKRIYQANKAGHTGALDPLATGMLPICLG
EATKFSQFLLDADKRYQVIAKLGERTDTSDAEGQVVETRSVNVTEQKILDSLPHFRGDIM
QVPTMFSALKHKGKPLYEYARAGIVVEREARPISIFELNFISYEAPYLTLEVHCSKGTYI
RTLVDDLGEYLGCGAHVSMLRRTAVSDYPADKMLTWEQLQQFAQDEDLAALDARLLPVDS
AVSKLPVLSLSEEQTKAVGFGQRVKFDNLQQLQGQVRLFSPQNVFLGVAEIGKDNVIRPS
RMVNL
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
atgtcgagaccccgtaaacgcggtcgtgatattcacggcgtatttttacttgataaaccg
cagggaatgtcgtctaacgatattttgcagaaggtaaaacgtatttatcaggcaaataaa
gcagggcatacgggcgcattggatccattggcaacaggaatgttgccgatttgtttaggt
gaggcgacaaaattttctcagtttttattggatgcggataaacgttatcaggtgattgcg
aaattaggcgaacgtacggatacttccgatgcggaagggcaagttgtagaaacccgctcc
gtgaatgtaacggaacaaaaaatccttgattctttaccgcactttcgcggtgatattatg
caggttcccactatgttttccgccttgaaacataagggtaaacctctttacgaatatgcc
agagcggggattgttgtagagcgtgaagcccgcccgattagcattttcgagcttaatttt
attagctatgaagcaccttatttaacacttgaagtgcattgttcaaaaggtacgtatatt
cgtacgttagtggacgatttaggcgaatatctaggttgcggcgctcatgtaagtatgctt
agacgtaccgcagtatccgattatccggcggataaaatgctgacttgggaacaattgcag
caatttgcgcaagacgaagatctagccgcattagatgcccgtttattaccggtggacagc
gccgtatcaaaattacctgttttaagtttgagcgaagagcaaacaaaagccgtgggtttc
ggtcagcgggtaaagtttgataatcttcagcaactgcaagggcaagttcgtttgttttcg
ccgcaaaatgtgtttttaggggtagcggaaataggtaaggataatgtaattcgccccagc
cgaatggtgaatttataa
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