Mannheimia succiniciproducens: MS2023
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Entry
MS2023 CDS
T00201
Symbol
rpoA
Name
(GenBank) RpoA protein
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
msu
Mannheimia succiniciproducens
Pathway
msu03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
msu00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
MS2023 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
msu03021
]
MS2023 (rpoA)
03400 DNA repair and recombination proteins [BR:
msu03400
]
MS2023 (rpoA)
Enzymes [BR:
msu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
MS2023 (rpoA)
Transcription machinery [BR:
msu03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
MS2023 (rpoA)
DNA repair and recombination proteins [BR:
msu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
MS2023 (rpoA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
RNA_pol_L_2
RepSA
BetaGal_dom3
Motif
Other DBs
NCBI-ProteinID:
AAU38630
UniProt:
Q65QY0
LinkDB
All DBs
Position
complement(1993211..1994200)
Genome browser
AA seq
329 aa
AA seq
DB search
MQGSVTEFLKPHLVDIEQVSPTHAKVILEPLERGFGHTLGNALRRILLSSMPGCAVTEVE
IDGVLHEYSSKEGVQEDILEVLLNLKGLAVKVQNKDDVFLTLNKSGIGPVVAADITHDGD
VEIVNPEHVICHLTDENASINMRIRVQRGRGYVPASARVHAQDEERPIGRLLVDACYSPV
DRIAYNVEAARVEQRTDLDKLVIELETNGAIDPEEAIRRAATILAEQLDAFVDLRDVRQP
EVKEEKPEFDPILLRPVDDLELTVRSANCLKAETIHYIGDLVQRTEVELLKTPNLGKKSL
TEIKDVLASRGLSLGMRLENWPPASIAED
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
atgcagggttctgttacagaatttttaaagccacacttagttgatattgagcaagtcagc
ccaactcatgctaaagtgatcttagaaccgttagagcgtggcttcggtcatactctgggt
aatgcattgcgtcgtattcttctatcttcaatgccaggttgtgctgtaactgaggtagaa
attgatggcgtattgcacgaatacagcagtaaagaaggcgtacaagaagatattcttgaa
gtgcttctaaacttaaaaggcctagcggttaaagttcagaataaagatgatgtttttctg
acattaaacaaatctggaatcggccctgttgttgcggcagacattacccatgacggtgat
gttgaaatcgtaaatcctgagcatgttatttgtcacttaaccgacgaaaacgcatcaatt
aatatgcgtattcgtgtacaacgtggcagaggctatgtaccagcatcagctcgtgtacat
gctcaagacgaagaacgaccaattggtcgcttgttagtggatgcatgctatagtcctgta
gaccgtattgcttacaatgttgaagcagcacgtgttgagcaacgtactgacttggataag
ttggttattgagcttgaaacaaacggggctattgatcctgaagaagcgattcgtcgtgca
gcaacaattttagcagagcagcttgatgcattcgttgatttgcgagatgttcgtcaacct
gaagttaaggaagagaaaccagaattcgatccgattctgttgcgtcctgttgatgactta
gagttgacagttcgttctgctaactgtttgaaagcagaaacaattcattatatcggtgat
ttagtacaacgtactgaagtcgagttattaaaaacgcctaaccttggtaagaaatccctt
actgagattaaagacgtgcttgcttctcgtggcttgtcactgggtatgcgccttgagaat
tggcctccggcaagtattgctgaagactaa
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