Methanobacterium subterraneum: BK009_00660
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Entry
BK009_00660 CDS
T05275
Name
(GenBank) hypothetical protein
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
msub
Methanobacterium subterraneum
Pathway
msub03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
msub00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
BK009_00660
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
msub03400
]
BK009_00660
Enzymes [BR:
msub01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
BK009_00660
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
BK009_00660
DNA repair and recombination proteins [BR:
msub03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
BK009_00660
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
H2TH
zf-FPG_IleRS
Fapy_DNA_glyco
NFACT_N
Zn_ribbon_6
Ribosomal_S13
Motif
Other DBs
NCBI-ProteinID:
AUB59317
UniProt:
A0A2H4VMJ0
LinkDB
All DBs
Position
126819..127619
Genome browser
AA seq
266 aa
AA seq
DB search
MSLQMEKTLKGKVITQIVLGDSSKSLIKQGMCNLNERSGEILNTPLKSIKNQGKWIFLEF
KNGKFLLLGEIIGKFIYHLENDHVPSKFHILFKFQDGTFLTFHSSLYAFLLVADKKQLEE
HKYAGNQGLTPISGEFTYDYFADILSRYKNRGIKGVLNLQSEISGLGNAYINDILYQAQI
HPKTKVYALDEDKKKKIYQCIISTINQAVKNRGSSSEYDLFGKKGNYIRIMDRKTENRKC
ERCGVKIVKMNVLGSSSYLCPECQKL
NT seq
801 nt
NT seq
+upstream
nt +downstream
nt
ttgtctcttcagatggaaaaaaccctaaaaggtaaagttataacccaaatcgtactgggg
gatagttccaaaagcctaattaaacagggaatgtgcaacctgaatgaaaggagtggggaa
atattaaatacacccctaaaatccattaaaaatcagggtaaatggatttttttggaattt
aagaatggaaaattcctgttattgggggaaataattggaaaatttatttatcacctggaa
aatgaccatgtaccctcaaaattccacattctttttaaattccaagatgggacattttta
acattccactcgtctctttacgcatttttactcgtagcagacaaaaaacagttagaagaa
cataaatacgcgggaaatcagggattaactcctattagtggggaattcacctatgattat
tttgctgatatcctgtcccgctataaaaaccggggaataaagggagttcttaacctgcag
agtgaaatttcaggattgggtaatgcatacatcaacgatattttataccaagctcagata
caccccaaaactaaagtttatgccctggatgaggataaaaaaaagaaaatatatcaatgt
attatcagtaccatcaaccaggccgtgaaaaataggggaagttccagtgaatatgattta
tttggcaaaaagggaaattacatccggataatggatcgaaaaactgaaaacaggaaatgt
gagcgatgcggtgtgaaaatcgtgaagatgaatgttttaggatcttcttcctatctgtgt
ccagagtgtcaaaaactgtaa
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