Methanobacterium subterraneum: BK009_06175
Help
Entry
BK009_06175 CDS
T05275
Name
(GenBank) AAA family ATPase
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
msub
Methanobacterium subterraneum
Pathway
msub04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
msub00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
BK009_06175
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
msub03019
]
BK009_06175
03009 Ribosome biogenesis [BR:
msub03009
]
BK009_06175
04131 Membrane trafficking [BR:
msub04131
]
BK009_06175
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
msub04147
]
BK009_06175
Messenger RNA biogenesis [BR:
msub03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
BK009_06175
Ribosome biogenesis [BR:
msub03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
BK009_06175
Membrane trafficking [BR:
msub04131
]
SNARE
SNARE associated proteins
Others
BK009_06175
Autophagy
Aggrephagy
Other aggrephagy associated proteins
BK009_06175
Exosome [BR:
msub04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
BK009_06175
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
AAA_16
RuvB_N
AAA_5
AAA_14
AAA_2
CDC48_2
TIP49
AAA_22
AAA_33
AAA_lid_PRS2_C
AAA_28
nSTAND3
ABC_tran
RNA_helicase
AAA_7
Sigma54_activat
DUF815
Mg_chelatase
NPHP3_N
AAA_18
ATPase
IstB_IS21
AAA_19
AAA_17
Bac_DnaA
Zeta_toxin
TsaE
AAA_3
DUF5906
SLFN-g3_helicase
NB-ARC
PhoH
Motif
Other DBs
NCBI-ProteinID:
AUB60308
UniProt:
A0A2H4VQD2
LinkDB
All DBs
Position
complement(1293480..1295762)
Genome browser
AA seq
760 aa
AA seq
DB search
MQDSGEIELRVAEALQQDVGKGMVRIDHELMAKIGASPGDIVEIIGKRTTGAIAGNSYPA
DVGLEIVRMDGLARSNAGTSIGEMITIRKAQPRMASKVVIAPAAKGMRIMASGDIIKRNL
MGRAVTRGDVIALVSPKRTKETLREFPGSEDIFREFFEATTPFSLGEIKFTVVSSNPAGL
VRINDTTQVEVRPEAVEVMEKKVPDVTYDDVGGLKKEISKVREMIELPLRHPEIFDRLGI
DPPKGVLLHGAPGTGKTLLAKAVSSESGSNFVAINGPEVMSKFVGEAEKKIREIFEEAAE
NAPTVIFIDEIDAIAPKREEVTGEVERRVVAQILALMDGLKERGKVIVIGATNRPDALDQ
ALRRPGRFDREIELRVPDREGRIEILEIHTRAMPLADDVNIDELAETTHGFVGADLAALC
REAAMNALRRVLPDIDLQEQRIAPGILEKLFVTNNDFLDSMKSISPSALREVFIEVPNVH
WEDIGGLDELKESLKEVVEWPLSNISSFQRIGIQPSKGILLFGPPGTGKTLLTKAVATES
KANFISVKGSEILSKWFGESERKISEIFKKAKQASPCIIFFDEIDAIAPIRGAAAGEPRV
TERMVNTILSEMDGLEELRGVVVIGATNRPDLMDPALLRPGRFDEVVLVPPPDEKARKEI
LKVHVGHMELDEDVKLKELAKKTEGYSGADIEVLCRKAGMIALHEDMNILKVSYRHFKSA
LKKINPSTTPKTTEYYEQIAQKLGRGLEPKKVREDFREVA
NT seq
2283 nt
NT seq
+upstream
nt +downstream
nt
ttgcaggatagtggtgaaatagagcttagagttgctgaagcactacaacaggatgtaggc
aaaggaatggtacgaatagaccatgaattgatggctaaaatcggagcatctcctggtgac
attgtggaaataatcggtaaaagaactaccggtgctattgctggaaactcctatccggca
gatgtgggattggaaatcgtgcgtatggacggattggctcgttccaatgcaggaacttcc
attggagaaatgatcaccatacgtaaagcacaacctagaatggccagtaaagttgtcatt
gccccagcagcgaagggaatgcgcataatggcctcaggagacatcataaaacgaaatctc
atgggacgggccgttaccaggggagatgtaatagccctggtatcccccaagagaaccaag
gaaacattaagggaattcccaggttcagaagacatattccgtgaatttttcgaagcaacc
acccccttttctctgggagaaatcaaatttaccgtggtatcatccaatcctgcgggactg
gttcgtatcaatgacactacccaggtagaagttcgaccagaagcagtggaggtaatggaa
aaaaaagtccccgatgtcacttatgacgatgtagggggacttaaaaaggaaatatcaaaa
gtccgggaaatgatagaacttcccctccgccaccccgaaatatttgaccgtctgggtata
gatccaccaaaaggagtgctattacatggtgcaccgggcacagggaagacattactggca
aaagcagtgtctagtgagagtggttcaaattttgtggccataaatgggcctgaagtaatg
agtaaatttgtgggagaggctgaaaagaagatacgtgaaatattcgaagaagctgccgaa
aatgctcccactgtgattttcattgatgaaatcgatgccatagcccctaaaagggaagaa
gtcactggtgaggttgaacgaagggtggtagctcagatattggcccttatggatgggttg
aaagaaaggggaaaggtaattgttattggcgccaccaaccgtcctgatgccctggaccag
gccttacgcagacctggacgctttgaccgtgaaattgaattacgtgtgcctgaccgggaa
ggaaggattgaaatactggagatacacacccgtgccatgcctctggcagatgacgttaac
attgatgaactggcagaaaccacccatggatttgtaggtgcagatctggcagcactttgt
agagaagcagctatgaatgctttaagaagagttttacctgatattgacctacaagagcag
cgtattgctcctggaatcctggaaaaactcttcgtaaccaacaatgattttttagattcc
atgaaatccatcagcccctctgcactgcgtgaagtattcattgaagtacccaacgtccat
tgggaagatatcggtggactggatgaactgaaggaaagcctgaaagaagtggtggaatgg
cccttgagcaacatctcctctttccagcgaattggaatacaaccttccaaaggaattctc
ctgttcggccctcctggaactggaaaaaccctgctcaccaaggcagtggccacagaatcc
aaggccaactttatctcagtaaagggatcagaaatactcagtaaatggttcggtgaatcc
gaacggaaaatctctgaaatattcaaaaaagccaaacaggcatctccctgcatcattttc
tttgatgaaatcgatgccatagctcccatcaggggtgccgctgccggtgaaccaagagtc
accgagcgaatggttaacactattctctccgagatggatgggctggaagaactcagagga
gtggtggttattggggccactaaccgtcctgatctaatggatccagcattgctacgtcct
ggaagatttgatgaggtggtactggtacctcctcctgatgaaaaagcacgaaaagaaata
ttaaaggttcacgtgggacacatggagttagatgaggatgttaaacttaaagaactggcc
aaaaaaactgaaggatactctggtgcagatatagaagttttatgccgtaaagctgggatg
atagctctccatgaagatatgaatattctaaaggtgtcctaccgccatttcaaatctgct
ctgaagaaaattaatccatccacaactcctaaaaccacggaatattacgagcaaattgct
cagaaactgggaaggggtttagaacctaaaaaggtgagggaagacttccgtgaagtggcc
taa
DBGET
integrated database retrieval system
