Methanobacterium subterraneum: BK009_08885
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Entry
BK009_08885 CDS
T05275
Name
(GenBank) hypothetical protein
KO
K20276
large repetitive protein
Organism
msub
Methanobacterium subterraneum
Pathway
msub02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
msub00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
BK009_08885
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF11
Big_13
CARDB
Big_3_3
DUF4625
Big_3_4
SGL
TusA
Big_7
TRAP_beta
A2M_BRD
DUF7619
DUF4131
YnaL
Trypan_PARP
Motif
Other DBs
NCBI-ProteinID:
AUB60776
UniProt:
A0A2H4VRS8
LinkDB
All DBs
Position
1820230..1826208
Genome browser
AA seq
1992 aa
AA seq
DB search
MKTEQFYLIFGIIFLFTLFTLPTTHASSLEQNYTYDSDFEKGTLVNLELNPNHDQLQLTN
KSQSSFSFIWVPNSNEGTVSKVDTVTGQEVARYRTGPQNNGNPSRTTVDLDGSCWLGNRQ
TGTAVKIGLLENGGYIDRNHNGIIETSRDLNGDGVITGSELLLWGQDECLLWEVVLIPGH
EGTYTPGDYTGPYANDNNNPGPRGVAVDSQNNVWFGCYGTGKYYYVNGTTGIIIKTLDIS
STGHTPYGAIIDQNGILWSSGSSGNNVVWIDPSNDSFGRVNVPHIAYGLGIDRNNHLFVS
GWTSRAFSRINTLTKTIEWTKACRTNSRGLVITDDGDVWIASYDPYFGWDIWATGYVSRY
SNNGELKATIQLGPANKGHIITGVSVDNSGKIWAVDNGSENIYRIDPAINLPDLTKALPG
TRHYGYSDMTGTVSQSITTQKGSWTVIHDSQTPYTPWGPLIWNSYEPNSTKITVRVKSSN
DGMNWSPWETVNNNSPLQNTPPGRYLVVETTLQRFQGSISPILYDLAVKALVADLSVQVD
GASEVIAGEQKTYQVTIENQGPYQSTNTIFIGDVPLKNPEYSIDNGTFWKTWTGTLQLEN
LDKNDFKSFLLRGLVPSWASGTLQFTGRISSDTQDINLTNNIYHHFTVVDTECDLSVGVT
DYPDPANPGEQLTYQVNIQNSGHSTARNVNLTGNFPLQNLEYSVDEGSNWNSWTGPLSLG
TIHPHSLKSVLFRGLIPSSATDILNCTVQVESSTADTNHTNNICNQSTTIISVSNLSVSM
TEIPETVAGDTITTTITVSNDGPSDAPNVTVSLKSILESLEQLINGNWLPMVGLLGLGTI
PAGESRSIQVRGTIPSSLEGALNIIARVNGSNSDYTSVLLLTNSTQLQVNMETPPSVQAG
HNLTFKVNVRNPGPSTPEMVILTGTFPLINPQFSMDDGVTWNPWRGMVELGKMDVNESVQ
IIFQGEIPSSLNGTLNLTTSLLIPGRDPQKLTGTPIGLEKIADLKITLTINKPHPYVEED
FQVKIRVENQGPGDSSQARVEYELPPGMEIIGNHIYDGNGNVWILGDIPRGGIVTLILKA
RSHSLNVLQPAAVAYGMEYDPNLLNNRDSSSLLAYLVPSSPILHPVNAATSSGVRGREGD
PKTVPMQKTGLAFNFTTFLIFVVFVGVSLRNNKYAKNKKLFLIATLFLALAASGAAFADT
PPDTADLNPERVKSGDVITIEANPTPSTTKVKVYLQDETYDMGKESDNIWQYKYVTPQVA
DGNYPVLITAWNTSGGQRQFQLNYTLDNTPPLMEATLNTNQVRSGDKITIKVESDQDTSM
IQALFRGETLNLAKQIDGTWNLEYIIPESTPDGLYTLIITGKDNLGNTATNYLPLTLDNT
PTIPPSTSTLTGKVTPDITRSGQNITIDAFTGPETITLDTVIMDVTHQLTKQADETWKLI
YAIPDAPDGSYPVLLTATDNNGTQKNTTLSLTIDNTPPQIDATLTPELVRTGNIITIIAT
TSSDAEKVTVTILGETLKLKKQSPNTWMLRYAVPTATDGLHNIHITATDKAGNQAPNTLS
FTVDNTPPILNPTLNQTLVKSGDKITITTTTSDPETQSVKAYIQNNTYQLTKKQDNTWSL
EYTTPLVGDGVYSIILIARDLVGNTNHTPLTFTVDYTPPIINPEINPEAAKPGETININV
HASPDTQSVVAIIGTQRINLTHNNGIWTTNYTIPLDATFDIHTIRIEGTDMAGNVGKNTA
SYEVQDPNPNPGPGSNPGSGPGPSPGPNPEPGPTPSPLNLSTQLQRDIARVRQAVQQGSF
QDEMNRSFIPDWTLQPPEPPEPTKEELNEWESFLIKFGAETILFGATALIPNEYLREVQN
GFTRVFSAFDDILRSLGFGKQINQVTQLIQRSHQALKNPAFNKWLNRLTAVMDGLGPNAG
IKILEKFLVKCFPSAAKEINIFLNAFSIVQFCLDPFGTLNAIIDAAIALFAKVIPDVEDL
TKFLIADPLHWI
NT seq
5979 nt
NT seq
+upstream
nt +downstream
nt
gtgaaaacagaacaattctatctaatttttggcatcatcttcctatttacactttttaca
ctccctacaacccatgcatcaagtttagagcaaaattacacttatgattctgattttgaa
aaaggaaccctggttaacctagaactcaacccaaaccatgaccagttacaactcaccaac
aaatcccaatcatctttctcattcatatgggtccccaatagcaacgaaggcacagtatcc
aaagtagatactgtaactggacaggaagtggcccggtaccgcaccggcccccagaacaat
ggtaacccctcccgaactaccgtggatctggacggtagctgctggctgggaaaccgacaa
accggcactgcagttaaaattggcctcctggaaaatggaggatacatcgaccgcaaccat
aatggaataatcgaaacatcccgggatctcaacggggacggagtaataaccggtagtgag
ctcctcttatgggggcaggacgaatgcctgttatgggaggtggtactcatccctggccac
gagggcacctacacccctggagattacaccggaccctacgccaacgataacaacaatcca
ggacctcgaggtgtggcagtagactcccaaaacaatgtctggtttggatgctatggaact
ggcaaatactactatgtcaatggcaccactgggataattataaaaaccttggatatttca
tctactggacacacaccctacggggcaataatagatcaaaacggaatactatggtcttca
gggagttcagggaacaatgtggtatggatcgacccgtccaatgacagcttcggacgtgtg
aacgttccccatattgcctatggtctgggaattgacaggaataatcatcttttcgtttct
ggatggactagccgagctttttcaaggatcaacaccttaactaaaaccattgaatggacc
aaagcctgccgaaccaattccaggggattggtgatcactgatgatggtgatgtgtggatt
gcctcttatgatccttactttggatgggacatttgggctaccggttatgttagccgttat
tctaataacggagaacttaaagcaactatacaattagggcctgctaataaaggacatatt
atcactggagtgtcagttgataattccgggaagatatgggctgttgacaatggtagtgaa
aatatctaccgcattgatccggctattaatctgccagatctcactaaagcacttcctgga
acccgccattatggttatagtgacatgaccggaaccgtttcccagagcatcaccacccag
aaaggtagctggacagtgatccatgactctcaaaccccatacacaccatgggggccttta
atctggaatagctacgaacctaacagcaccaaaatcacagtaagggtaaaaagttccaat
gatgggatgaactggtcaccatgggaaactgttaacaataactcaccactgcaaaacacg
ccacccggcagatatttagtggttgaaactaccctgcaaagatttcagggaagtatctca
cccatcctttacgatcttgcagtcaaagcactggtggctgacctatctgtacaagttgat
ggagcttctgaagttattgctggagaacaaaaaacttaccaggtcaccatagaaaaccag
ggcccataccaatccaccaacactatattcattggtgatgtaccattaaaaaatccagaa
tactccatagacaacggaacattctggaaaacctggactggaacgttacaactggaaaac
ctggataaaaatgattttaaaagcttcttactaaggggtttagtgccttcctgggccagt
ggcacattacaattcactggaagaatctcctcagacacccaagacatcaacctcaccaat
aacatttaccaccacttcacagttgtggacacagagtgtgacctttctgtaggtgttact
gattacccagaccctgccaatcccggggaacaactcacctatcaagtaaacattcagaat
agtggccattccaccgcccgtaacgttaatctcactggcaactttccattacaaaacctg
gaatattcagtagatgagggtagtaactggaattcatggactggccctttgagtctggga
acaatacacccccatagtttaaaatcagtattgttccggggattgataccctcctctgcc
actgacattttaaactgcacagttcaggtggaaagtagcaccgccgataccaaccatact
aataacatctgcaaccaatccaccaccattataagtgtttcaaacctctcagttagcatg
actgaaatcccggaaactgtggctggagatacaatcaccaccaccataactgtgtctaat
gatggaccatcagacgcaccgaatgttacagtttcactgaaatccatcctggaatcactg
gaacagttaatcaatggcaactggctccccatggtaggtttattaggtttgggaaccatt
cctgcaggagaaagtcgaagcattcaggtgagaggaaccataccctcctccctggaaggg
gccttgaacatcatagcccgggtaaatggaagtaactcagattacaccagtgttctttta
ttaactaactccacacaactccaggtgaatatggaaacaccccccagtgtccaggcaggg
cataatttaacctttaaagtaaatgttagaaatcccgggccttctacccctgagatggta
attctcactggaacgttccccctaattaacccccagttttccatggatgatggagtaacc
tggaatccctggagggggatggtggaactaggcaagatggatgtcaatgaatctgtacaa
atcattttccagggagaaataccatcatcccttaatggtaccctgaatctaaccacctcc
ctactaataccaggcagggacccgcagaaactcaccggcactcctattggtctggagaaa
attgcggatcttaagatcaccctcaccatcaacaagccccatccctatgtggaggaggat
ttccaggttaaaatcagggtggaaaaccagggtccaggtgacagcagccaggcccgggtg
gaatatgaactcccaccaggcatggagataattggaaaccacatctacgatggaaatggg
aatgtgtggatcctgggagacataccccggggaggaatagtcaccctgattttaaaggca
cgttctcatagtttaaatgttctgcagcctgcggctgtggcttatggcatggaatacgat
ccaaacctccttaacaatcgagattcatcatcactcctggcttatttagtaccatcaagc
cctatcctacacccagttaatgcagccacttcctccggtgttaggggacgggagggagat
cctaagaccgtgcctatgcaaaaaacagggctagcctttaatttcaccacttttctgatc
tttgtggtttttgtgggagtttccctccgtaacaacaagtatgcgaagaataaaaagtta
ttccttattgccaccctatttttggccctggcagcatccggtgcagcatttgcagacaca
ccaccagacactgcagatttaaacccggaaagagttaaatccggcgatgtgatcacaatt
gaagccaatcccaccccatccaccaccaaagtaaaagtttacctccaagatgagacttac
gacatggggaaagaatctgacaacatctggcaatataaatatgtaactccacaggtggct
gatggtaattatccggttttaatcactgcctggaacacctctggaggtcaaagacagttc
caactcaactacacacttgataacactccacctctaatggaagccaccctcaacaccaac
caggtcagatccggagacaagatcaccataaaagtagaatcagaccaggatacatctatg
atccaggcactatttagaggggaaactctgaatctggctaaacaaattgatggaacgtgg
aacctggaatatattataccagaatccacaccagatggtttatacaccctcataatcaca
ggaaaggataatcttggtaacactgccaccaattaccttcccttaacccttgataacacc
cccaccattcctcccagtacatccaccttaacgggtaaagtcaccccagacatcaccaga
tccggacaaaatataaccattgacgcctttactgggcctgaaaccatcaccctggatacg
gtgataatggatgtgacccatcaactcactaaacaagcagatgaaacctggaaacttatc
tatgccattccagatgcccctgacggaagttatccagtactgctcaccgccactgataac
aatggcacacagaaaaacaccacactttccctaaccattgataacaccccaccacaaata
gacgccaccttaacccccgaactggtgcgtactggtaatataatcaccataatcgccacc
accagttctgatgcagagaaggtaacagtaaccatattaggggaaaccctgaaactcaaa
aaacaatcccccaatacctggatgctcagatacgcagtaccaactgcaaccgatggatta
cacaacatccatatcaccgccactgacaaagcaggtaaccaggcaccaaacactctcagc
ttcacagtggataacaccccacccatactaaaccccacattaaaccagacactggttaaa
tcaggtgataagatcaccataaccaccaccacatcagacccggaaacccaatctgtgaaa
gcatacatccaaaataacacctaccaactcaccaaaaaacaagacaacacctggagcctg
gaatacaccacacccttggtgggtgatggggtctactccatcatactcattgcccgggac
ctggtgggtaacaccaaccacacaccactcaccttcacagtagactacacaccaccaatc
atcaacccggaaatcaacccagaagcggctaaacccggagaaacaataaacataaacgtc
cacgcctccccagacacgcagagtgtggtggccataatcggtacacaaagaatcaacctc
acacacaacaatggaatttggaccacaaattacaccataccactagacgccacctttgac
atccacaccatacgaatagaaggaaccgacatggcaggaaatgttggtaaaaacactgcc
agttatgaagtgcaggatcctaaccctaaccccggacctggatctaatcctgggtccggc
ccgggacctagccctggacctaatcctgaaccaggaccaacacccagccccttaaaccta
agcacacagttacaacgtgacatagccagagtcagacaagcagtgcaacaaggcagcttc
caagacgaaatgaaccgatcatttatacctgactggactttacaacctcctgaaccacct
gaaccaacaaaagaagagttaaacgaatgggaatctttcttaattaaatttggcgctgaa
acaattctatttggcgccacagcattaataccaaacgaatacctccgagaagtacaaaac
ggatttacgagagtcttttctgcttttgatgacatattaagaagcttaggatttgggaaa
caaatcaatcaagtaactcaattgatacaaagatcacatcaagccctaaaaaaccctgca
tttaataaatggcttaatcgattgacagcagtgatggatggtttaggtccaaacgcaggt
attaaaatcttagaaaaattcttggtcaaatgcttccctagcgccgctaaagaaatcaat
attttcttaaacgcattctccatcgtgcagttctgtctagatccattcgggacactaaac
gctattattgatgcagctatcgctttatttgcaaaagtaattccggatgttgaagatctt
acaaaattcctcatcgccgacccattacattggatctaa
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integrated database retrieval system
