Methanobacterium subterraneum: BK009_09365
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Entry
BK009_09365 CDS
T05275
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
msub
Methanobacterium subterraneum
Pathway
msub00300
Lysine biosynthesis
msub00470
D-Amino acid metabolism
msub01100
Metabolic pathways
msub01110
Biosynthesis of secondary metabolites
msub01120
Microbial metabolism in diverse environments
msub01230
Biosynthesis of amino acids
Module
msub_M00527
Lysine biosynthesis, DAP aminotransferase pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
msub00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
BK009_09365
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
BK009_09365
Enzymes [BR:
msub01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
BK009_09365
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
AUB60860
UniProt:
A0A2H4VS54
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All DBs
Position
1929232..1930518
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AA seq
428 aa
AA seq
DB search
MNLHFKTNEKGNLDIGGADALEIAQEYGTPLYVTDEMRVRDNYRRVYQAFTNEYEDFKIF
YAAKANTSLAMMKILEQEGSCIDAVSPGEIYTALMAGFEGDRILYTGNNVTTEELKFALD
AGVRVNLDSVSMLERLAKIPGAEGTKISFRVNPMVGAGHHDHCITGGELSKFGIMEHEAV
QVYQKAIELGFKPVGIHTHIGSGILDPEPFKLAVQVLMDVAGRVNKEAGVTFEFIDFGGG
LGIPYTPEEGLLDIEKFAKEIVGLYQDKLAEHNMGQPTMCIEPGRYIVGDASYLLTQVNT
VKQSYRKFIGVNAGFNTLLRPTMYGSYHHILVADKPEAEPTENIDVAGNICESGDLFARA
RPLPEIKEGDILAIMNAGAYAFSMASQYNSRPLPAEVMVCDGTVDIIRERENFADLYRKQ
NIPLRLLK
NT seq
1287 nt
NT seq
+upstream
nt +downstream
nt
atgaacttacactttaagaccaatgaaaaaggcaacctggacatcgggggtgccgatgcc
ctggaaattgcccaggaatatggaacaccactttatgttacagatgaaatgagagtgcgg
gacaattatagaagagtctatcaagcattcaccaatgaatatgaagactttaaaatattc
tacgctgctaaagccaacaccagcctggcaatgatgaaaatattagaacaggaagggagt
tgtattgacgctgtttcccctggagaaatctacaccgcattaatggcaggatttgaaggt
gaccggattctttacacaggaaacaatgttaccactgaagaactgaaattcgcccttgat
gcgggtgtgcgcgtgaacctggacagcgtgtccatgctggaacgtcttgcaaaaattcca
ggagcagaagggactaaaatatcattccgagtcaaccccatggtgggtgctggtcaccac
gaccactgcatcaccgggggagaattgtccaagtttgggataatggaacatgaagcagtg
caggtttaccaaaaagcgattgaactcggattcaaaccagtgggtatccacactcacatt
ggatctggtattctggaccctgaaccatttaaattagcagtacaagtccttatggacgtg
gctggccgggtgaacaaggaggcaggtgttacatttgaattcatagatttcggtggaggt
ctgggaataccttacactcctgaggaaggtttactggatattgagaaattcgcaaaggag
attgtgggactctaccaggataaacttgcagaacacaatatgggtcaaccaaccatgtgc
atagaaccgggacgttacatagtaggagatgcatcttaccttttaacccaagttaacact
gttaaacagagttaccgaaaatttataggggttaacgcaggatttaacacattactgcga
cctaccatgtacggatcttaccaccacatcctggtggcagataaacctgaagcagaaccc
actgaaaacatcgacgtggctggaaatatctgtgaatctggagatcttttcgccagggcc
cgaccactaccagaaatcaaggaaggtgacattcttgctattatgaatgccggggcctat
gcctttagcatggccagccagtacaactcccgaccactgccggcagaggtgatggtttgt
gatggtaccgttgatataataagggaaagggaaaacttcgctgatctataccgtaaacag
aatattcccctgaggctgttaaaatga
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