Methanobacterium subterraneum: BK009_10000
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Entry
BK009_10000 CDS
T05275
Name
(GenBank) tRNA pseudouridine(13) synthase TruD
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
msub
Methanobacterium subterraneum
Brite
KEGG Orthology (KO) [BR:
msub00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
msub03016
]
BK009_10000
Enzymes [BR:
msub01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
BK009_10000
Transfer RNA biogenesis [BR:
msub03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
BK009_10000
Prokaryotic type
BK009_10000
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
Motif
Other DBs
NCBI-ProteinID:
AUB60979
UniProt:
A0A2H4VSA4
LinkDB
All DBs
Position
complement(2080710..2081963)
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AA seq
417 aa
AA seq
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MLNAETYLTPQKGIGGQIRTKNEDFYVEEIPESNPSGEGPNTWLWIEKNSRTTLDVLLDI
ARELKINRKQMGFAGMKDKKAVTRQWICVSNKTPEELQGLGEKLHNVKIIDIIPNQKKLR
MGQLVGNKFRLMVRDVEDPGAAAQEAQEILNQLKERGVPNYYGYQRFGKDRPNTHLVGKA
LIMGGVKEAVDRYIGHPYDTEPKHIQEARRFYDEGELEESLESMPSGMRYEKMMLRALIK
EMKKRGELTEKSYILALRSIPKPLSRMLVHAYQSYLFNRAVSERTKLGIDQYVKGDILID
NEEHLIHEFSEEEIDNEIKNFQAHPSSPLYGSKVPLAGGKLGEMEQKILDGEKLKLEDFT
VPQMPKLGSHGIRRAMRFKIWDVSAESTDEGVLVSFSIPKGCYATAVLREVMKVDVY
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atgttaaatgcagaaacatatctcacccctcaaaaagggataggggggcagatcagaacc
aaaaatgaggatttctatgtggaggaaatcccggaaagtaatcccagtggtgaagggcca
aacacctggctttggattgagaaaaatagtaggaccactctggatgtgcttttagacatt
gcccgtgaacttaaaataaaccgaaagcaaatgggctttgcaggaatgaaggataaaaag
gcagtcaccagacagtggatatgcgtaagtaacaaaacccctgaagaactccaggggctg
ggagaaaagctccataatgttaaaattattgacataattcccaatcagaagaaacttcga
atggggcaactggtggggaacaagttccgtttaatggtaagagatgttgaggatcctggg
gcagctgctcaggaagctcaggaaatacttaaccagttaaaggagaggggagtgcctaac
tattatggataccagcgttttggtaaggaccgtcccaacacccacctggtgggtaaagca
ttaatcatggggggtgtaaaggaggcggtggaccgttacattggacacccttacgatact
gagccaaaacacatccaggaggcccgtcgattttatgatgaaggggaactggaggagtct
ctggagtcaatgcccagtgggatgagatacgagaagatgatgttacgtgccctaatcaag
gagatgaaaaaaaggggcgaattaacggagaaatcctatattttggcacttagaagcatc
cccaaacccctgagcaggatgcttgtccatgcataccagtcatatcttttcaacagagcg
gttagtgaacgtaccaagcttggtattgaccagtacgtgaagggagatattttaattgat
aatgaagaacatctgatccacgaattttcagaagaagaaattgataatgaaattaaaaac
ttccaggcccatccatcatcgccactctacggtagtaaagtgccactggccggtggtaaa
ctgggagaaatggagcagaagatattggatggggagaaattgaaacttgaggactttacc
gtgccccagatgcctaaactgggtagtcatggtatacgcagggccatgcgctttaaaata
tgggatgtttctgctgaatcaactgatgagggtgttctggtgagtttttccattcccaag
ggttgttacgcaactgcagttttaagagaagttatgaaggtggatgtgtattga
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