Methanobacterium subterraneum: BK009_11645
Help
Entry
BK009_11645 CDS
T05275
Name
(GenBank) DNA repair protein Rad50
KO
K03546
DNA repair protein SbcC/Rad50
Organism
msub
Methanobacterium subterraneum
Brite
KEGG Orthology (KO) [BR:
msub00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
msub03400
]
BK009_11645
DNA repair and recombination proteins [BR:
msub03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
BK009_11645
Archaeal homologous recombinant proteins
BK009_11645
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
AAA_23
AAA_27
SbcC_Walker_B
AAA_29
Rad50_zn_hook
AAA_15
AAA_21
DUF1664
DUF5082
MukB
ABC_tran
Motif
Other DBs
NCBI-ProteinID:
AUB61265
UniProt:
A0A2H4VT31
LinkDB
All DBs
Position
complement(2407690..2410389)
Genome browser
AA seq
899 aa
AA seq
DB search
MIIESLHMKNFKSHQDTSIDFDTGISIILGGNGAGKSSILEAVSFGLFKQYTSKKIEQLI
TIGQKRMSVEIQFTSHGRTYRVLRERSKTSSKAIMKIKEGGRFQSLVSGDRQVTMEVQNL
LDMDGDLFLNAVYVRQGEIADLIEKTSSEKKQMIGRLLGIDSLEKAWKNIKIILDRYKEE
KIRLEGRIESSEGLKDEFQTKKHKQKELSIQIKDINLKREENIIESDLLREKKEILDRRS
LEFEKSTTILKSKTDFLEQLEKTKKDLDNQLSEIIIKEEEINRVKPRLKKLEVLKNLQDR
IKELKDLQKDEKKIVKIQDDIEHFRDILNENEQYYNDYSRLDDEINNLQYAKDQFEGSRV
LIQQYRERRSKVEVKINQSLEKINRVLEKNNQILSTEFESVEEFQDHLSTFKPQLEEEIQ
DASESIQELKRELSNLQVKSENLDKPIKELERVKELCPICKSTITPQKRDELITDYQSEL
ENNHQRSEILKEKLKGIEDKKKNLDTQHFRIQSINLGILNEYLKSVDENRQEIKNINSNL
KELDEKMVILEKIEKDIAQNKSKLQDIKGNYEKYLAARGSLESLGDYEEHLSGLDEIKAS
IRELKKKISILMEIAGDSMENLPGEIAYLEDLSKKYQHLMGEISQKDSLLRRMDENQRLI
LDTLEELKEVQKVVEDSKYNKESHERVKKEWELKNEELMDLSGQKQLLVGQLHQLSDSIQ
TIKEKLNSLQEYETELKNLKDFLKLLNLIRDIYGKDGVQKDLRNLSRPLIEEKTRELFEK
FNFEYSDVRLDEDYDVTIYGPGGESSLDMISGGEKIAVALALRLGITQVLSGGSLEMIML
DEPTIHLDAYRRQELIDLLKRMSIIPQMIIVTHDADLEDAADNIMKIEKEEGNSFLAES
NT seq
2700 nt
NT seq
+upstream
nt +downstream
nt
atgatcattgaaagtctccatatgaagaacttcaaatctcaccaggataccagtatcgat
tttgatactggcatatcaataatattaggtggaaatggtgcgggtaagtccagtatcctg
gaagcagtgagttttggactctttaaacaatacaccagtaaaaaaattgaacaacttata
accattggccagaaaaggatgtccgtagagatccagttcactagccatggtcgaacctac
cgggtactgcgggaacggagtaaaacatcatctaaagccattatgaagattaaagagggt
ggaagattccagtcactagtttcaggagataggcaggtgacaatggaagttcaaaacctt
ttggatatggatggagatctgttcctcaacgcagtctatgttcggcagggagagatagct
gatctcattgagaaaacttcatcagaaaagaagcaaatgattggaaggcttttgggtatt
gattccctggaaaaggcctggaaaaatataaaaatcatcctggacagatacaaagaagaa
aaaatccgactagagggcaggatagaatcctctgaaggcttgaaggatgaatttcagacc
aaaaaacataagcaaaaggaattatccatccaaattaaagatatcaatcttaaaagagag
gaaaatatcattgaatctgatctgctcagggaaaagaaggaaattctagatagaaggagt
ctagaatttgaaaaatccaccaccatcctgaaatccaagacagacttccttgaacagctt
gaaaaaaccaaaaaagatctggataaccagttaagtgaaattatcattaaagaagaggaa
attaatcgtgtgaaaccacgtttaaagaaacttgaagttttaaaaaatcttcaggatagg
attaaagagttaaaggatctgcaaaaagatgaaaaaaaaatagttaagatccaggatgac
attgaacattttagagatattttgaatgaaaatgaacagtattacaatgattactctcgt
ttagacgatgaaattaataatttgcagtatgccaaggaccagtttgaaggaagccgcgta
cttattcagcagtacagagaaagaaggtccaaagttgaggttaaaatcaaccagtccctg
gagaagataaatcgtgttctagaaaaaaacaaccagatcctgagtactgaatttgaatct
gtggaagaattccaggatcatttatccaccttcaaacctcaattagaggaggaaatccag
gatgcttctgaatctattcaggagttaaaaagggaattatcaaacctgcaagttaaaagt
gagaacctggataaacctataaaggaactggaacgggttaaagagctttgtccaatctgt
aaatctaccatcactcctcagaagagagatgaactgataacagattaccagtcggaacta
gaaaacaaccatcaaagatctgagattttgaaggaaaaattgaaaggaattgaggataaa
aaaaagaacttggacacccagcatttccggattcaaagtataaatcttgggatcttgaat
gaatatctgaaatccgtggatgaaaaccggcaggaaattaaaaacattaattccaatctc
aaggaactggatgagaagatggttatcctggagaaaattgaaaaggatattgcccagaat
aaatctaaacttcaggatattaaaggaaattatgagaagtatctagctgctcgtggttct
ctggaatcccttggagattatgaagaacatttgtccggtttagatgaaattaaagcatcc
ataagagagttgaagaagaagatcagcattctcatggaaattgccggggacagtatggaa
aacctccctggagaaatagcttacctggaagatttgagtaaaaaataccagcacttaatg
ggtgaaatcagccagaaagactcactcctccgacggatggatgaaaaccagaggctaata
ctagatacccttgaagagttgaaagaagtccaaaaagtggttgaagattccaagtacaat
aaagaatcccatgaaagggttaagaaggaatgggagttgaaaaacgaggagttgatggat
ctcagtggccagaagcagttactagttggccaactccaccaactatcagattctatccaa
accataaaagagaaactgaactccctccaggaatatgaaacagaattaaagaatttgaag
gattttttgaaacttttaaatcttatccgggatatttatggtaaggatggtgttcagaag
gatttgagaaacctatccagaccgcttattgaagagaaaacgcgggagttgtttgagaag
ttcaacttcgaatactccgatgtaagactggatgaggattacgatgtgactatctatggt
cctggtggtgaaagcagtctggacatgatcagtgggggtgaaaaaatagcagtggccctt
gctctgaggttggggataacccaggtactctctggaggtagtttagagatgatcatgctg
gatgaacccaccatccaccttgatgcctatcgtcggcaggaactgattgatctattgaaa
agaatgtccattataccccagatgattattgttacccatgatgcggatctggaggatgct
gctgataacatcatgaagatcgaaaaagaagagggtaattcatttctggcggaatcttaa
DBGET
integrated database retrieval system
