Methanobacterium subterraneum: BK009_11990
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Entry
BK009_11990 CDS
T05275
Name
(GenBank) peptide chain release factor 1
KO
K03265
peptide chain release factor subunit 1
Organism
msub
Methanobacterium subterraneum
Pathway
msub03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
msub00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
BK009_11990
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
msub03019
]
BK009_11990
03012 Translation factors [BR:
msub03012
]
BK009_11990
Messenger RNA biogenesis [BR:
msub03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
BK009_11990
Translation factors [BR:
msub03012
]
Eukaryotic type
Release factors
BK009_11990
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
eRF1_2
eRF1_3
eRF1_1
baeRF_family10
acVLRF1
Zn_ribbon_8
DpnI
eIF-5_eIF-2B
Zn_ribbon_Elf1
HypA
DUF5816
DZR
DUF3300
PWP3A-B_C
Zn_ribbon_Nudix
PknG_rubred
baeRF_family2
Zn_ribbon_15
Motif
Other DBs
NCBI-ProteinID:
AUB61329
UniProt:
A0A2H4VT91
LinkDB
All DBs
Position
complement(2476644..2477873)
Genome browser
AA seq
409 aa
AA seq
DB search
MSEPSSTELYEVKRTLKELSDKKGRGTELVSVYIPPNKQISDVVKHMREELSQSANIKSK
QTKKNVQSAIEVIMQRMRLFPKPPERGLVLFVGMIPKGGPGTEKMETYVFEPPEPVQTYT
YHCDSQFFLEPLQEILEDKEIYGLAVVDRKEATIAIMKGKRVDIVKTLTSGVPGKHKAGG
QSQRRFDRLIELAAHEFLKRIGEHMNEAFLELEGLKGIIIGGPGHTKEDFINGDYLHHEI
KQKIITTVDTSYTGDFGIREVIDKSMDVLTEIDIMREKKLVQRFLTELVDENGLASYGEA
EVRQNLINGAVEVLLLSEDIKSKRYTFQCHSCGNQVEKTIKNEGEVKDKSCENCGETMKV
SSSEDVIGDFVTLAEEVGSEVEIISTETEEGMQLLRAFGGIGAILRYRV
NT seq
1230 nt
NT seq
+upstream
nt +downstream
nt
atgtcagaaccatcatcaaccgaactttatgaggttaaacgcaccctgaaagaactctct
gataaaaaagggagaggtaccgagttggtgtctgtttacatacctccaaataagcagatc
agcgatgtggtaaagcacatgcgagaagaactcagccagagtgctaatattaaaagtaag
cagaccaagaaaaatgtccagtccgctattgaagttataatgcaacgtatgcgacttttc
ccaaaaccacctgagagggggctagttctttttgtggggatgatccccaagggaggtcca
ggcaccgagaagatggagacctatgtcttcgaaccaccagaaccagttcagacctacact
taccactgtgactcccagttcttcttggaaccacttcaggaaatcctggaggataaggag
atctatggactggcagttgtcgaccgtaaagaagctactatagccattatgaaaggaaaa
agagtggacatagttaaaacccttaccagcggtgttcctggaaaacacaaagccggtggg
caatctcagagacgtttcgaccggttaatcgaactggcagcccatgagttccttaaaagg
attggggaacatatgaacgaagcatttttagaattagaaggtctaaaaggaattattatt
ggaggtccgggccatacaaaagaggattttattaatggagattatttgcaccatgaaatc
aaacaaaaaatcataaccaccgtggacacctcctacacaggtgactttggtattcgtgag
gttattgataaatccatggatgtcctcacggaaatagacatcatgcgtgagaaaaaactg
gttcaacgtttcctgacggaactggtggatgaaaatggcctggcatcatatggggaagct
gaagtacggcagaacctgattaacggtgcagttgaagttctattactctcagaggatatc
aaatctaaacgatacaccttccagtgtcattcctgcggaaatcaagtagagaagaccatt
aaaaatgagggtgaagttaaggataaatcctgtgaaaattgtggtgaaaccatgaaggtt
tcttcttctgaagatgttattggtgactttgttaccctggctgaagaagtaggctctgaa
gtggagatcatatccactgaaactgaggaaggaatgcaactactccgcgcattcggaggt
atcggagccatattgaggtacagggtgtag
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integrated database retrieval system
