Methanobacterium subterraneum: BK009_12175
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Entry
BK009_12175 CDS
T05275
Name
(GenBank) deoxyribodipyrimidine photolyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
msub
Methanobacterium subterraneum
Brite
KEGG Orthology (KO) [BR:
msub00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
msub03400
]
BK009_12175
Enzymes [BR:
msub01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
BK009_12175
DNA repair and recombination proteins [BR:
msub03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
BK009_12175
Prokaryotic type
BK009_12175
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_photolyase
FAD_binding_7
Methyltransf_3
Motif
Other DBs
NCBI-ProteinID:
AUB61362
UniProt:
A0A2H4VTG6
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All DBs
Position
2512880..2514229
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AA seq
449 aa
AA seq
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MIHTERIKKLNQKPLKEGDYVLYWMQASPRAHCNHALEYGIKKANRLKKPLVVFFGITKQ
FPEANNRHYTFLLQGLQHVQNSLDKRGIKMAIQIVSPPKGAIELAENASVVVVDKGYLTI
QREWVKKAIDWLKCSLIQVETNVVVPVETASAKEEYSAATFRRKINKKLDEFLVPLKMEK
LITHSSDINMDSYSFDDLHSIISQLGLKSKVAPVSKYKGGTLNAIKLLGTFIKHKLDHFP
DRNDPSTDYLSHMSPYLHFGQVSPLHIALEILKTKSPGKSTYLEELIVRRELAVNFVYHN
PEYDNLKCLPDWAYKTLSKHQNDKREYTYSFKEFENAGTHDPYWNAAQLEMVHTGKMHGY
MRMYWGKKILEWTHDPEEAYQIALKLNNKYELDGRDPNAYAGVAWCFGKHDRAWKEREIF
GKVRYMNDRGLRRKFKIDSYVGAVNNLVS
NT seq
1350 nt
NT seq
+upstream
nt +downstream
nt
atgatccatactgaacgtataaaaaaactaaaccagaaaccgttgaaggagggtgattat
gttttatactggatgcaggcttctccccgggcacactgtaaccatgcactggaatacggt
ataaaaaaggccaaccgccttaaaaaacctttagtagtattttttgggataactaaacaa
tttccggaggccaataaccggcattacacttttcttctccagggacttcagcatgttcaa
aattcactggataaaaggggaataaaaatggctattcagatagtctccccaccgaaaggt
gcaattgaactggccgaaaatgcttcagtggtggttgtggataaaggctaccttactata
caacgtgaatgggtcaaaaaagccatagattggttaaaatgttcgttaatacaggtggaa
accaatgtggtagttcccgtggaaactgcatcagccaaggaagagtattctgctgccact
ttccgcagaaagatcaataaaaaactggatgaatttttagtaccccttaaaatggaaaaa
ctaattacacattctagtgatattaacatggattcgtattcatttgatgatttacattcc
attatttctcagttaggattaaaatctaaagtggcccctgttagtaaatacaagggtggg
actttgaatgccattaaactactgggtactttcattaaacataagctggatcattttcca
gatagaaatgatcccagtaccgactatctatcccatatgagtccctacctccacttcggc
caagtatccccgttacatatagcactggaaattttgaaaactaaaagtccgggtaaatcc
acctacctggaagaactcatcgtccgcagagaattggctgtgaatttcgtttatcataac
cctgaatatgataatttgaaatgtctccctgattgggcttacaaaacacttagtaaacat
cagaacgataaacgggaatatacttattcctttaaagaatttgaaaatgcaggaacccat
gatccatactggaatgcagctcaactggaaatggtccatactggtaagatgcatggatac
atgcgcatgtactggggtaaaaaaatcctggaatggactcacgatcccgaagaagcctac
caaatagctcttaaacttaacaacaagtatgaattagatggccgtgaccccaatgcttat
gcaggagtagcctggtgttttggtaaacatgatcgggcctggaaagagcgggagatattt
gggaaggtacgctacatgaatgaccgaggtttacgccgaaaatttaaaatagatagttat
gtaggtgcagtgaataacttggtaagttaa
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