Metamycoplasma subdolum: R9C05_00395
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Entry
R9C05_00395 CDS
T09522
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
msud
Metamycoplasma subdolum
Pathway
msud03030
DNA replication
msud03430
Mismatch repair
msud03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
msud00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
R9C05_00395 (dnaE)
03430 Mismatch repair
R9C05_00395 (dnaE)
03440 Homologous recombination
R9C05_00395 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
msud03032
]
R9C05_00395 (dnaE)
03400 DNA repair and recombination proteins [BR:
msud03400
]
R9C05_00395 (dnaE)
Enzymes [BR:
msud01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
R9C05_00395 (dnaE)
DNA replication proteins [BR:
msud03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
R9C05_00395 (dnaE)
DNA repair and recombination proteins [BR:
msud03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
R9C05_00395 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
HHH_6
PHP
HHH_3
tRNA_anti-codon
Mug62
Motif
Other DBs
NCBI-ProteinID:
WPB50609
LinkDB
All DBs
Position
97332..100337
Genome browser
AA seq
1001 aa
AA seq
DB search
MKLINGHLNTSYSFLKSSITSDELKDFLLQENPEYLVISEYNNFFSYAQFLLFSKKNNIK
IIFALEVDIKLENKKYRYILYAQNEEGFNLIKRISNEILSGKELCSLDTLLGNKNIKIVE
HPLFGFYTVEHKKLVSSSNYFYSFQLSDIQKNKEFIIKNLHNSLVINHFCILDISENEII
NLLSKTNGDEKDKNIVYQPLNFEFEIKDELEKTLINNTNNLLKSCYFETKINPYVLPHFE
NELNMNSKQFLRYLLKQKLTQKFNEKTFTKEYQKRLEYELSIIEKLNFEDYFLIIQDYVN
WAKNNKISIGPGRGSASGSLVSFILGITEIDPLKYGLLFERFLNPERVSMPDIDVDVQDN
RRDEVIEYLIKKYGEKRVANIVTFSTLGKKSAIRDVLRVYGVSPSLINEISKSISDEDIN
LVEEYQKNQKFALLMARIENITNLLITQIVYNSSKLEGLYRQTGTHAAGIVISPKNIEEI
IPTYFLSNNVQQVQSAMENLEPFGLLKMDILGLKTLTTIQEILDKINEGKKEEFKLKNIN
FNDKKTFELLTSGQTTGIFQLESPGMIKTLQKVKVSTFNDIVAVISLFRPGPMLNLTTYA
RRKHGIEKVPKISPEFDKIVEETYGIIVYQEQIMQIAQKVAKMSYGEADILRRAISKKKL
DEMERLKEKFIKDSIKNNYPKQISEKIYAAIEEFASYGFNKAHAVSYAYLSYQMAYLKAH
FPLEYYAAIISSNRGSQTNINKYVNEAKSLNISVASPDINFSSFVSEIKNETIYLPLAMI
KGIGPETIKNLVKNRKEYGPYKSFAHFCMCVSLIKNFGISNIETLIKASALRCFNLSQKT
MLHEISNPNSYLMLSLKMQNLENLNLLDISTKSSEIEIKNTKDDKIEEIKANEIEFLGQS
YNTNILQSWEKIGSQLKDLHFGNSYVVVVECENVLKRVARNGKDFYILTLSDSSQKLQVF
AFNATEDLIKFKNKIIEAEIILKSDGRHKLTKIKEYFVTKG
NT seq
3006 nt
NT seq
+upstream
nt +downstream
nt
atgaaattaattaatggacatttaaatacatcatattcatttttaaaaagttctattact
agtgatgaattaaaagattttttattgcaagaaaaccctgaatatttagtaattagtgag
tataacaacttttttagttatgctcagtttttacttttttctaaaaaaaataacataaaa
attatttttgctcttgaagttgatattaaacttgaaaacaaaaaatatcgttatatttta
tatgctcaaaatgaagaaggattcaacttaataaaaagaatttcaaatgaaattttatca
ggtaaagaattatgttcattagacactttgcttgggaataaaaacattaaaattgttgaa
catcctttatttggattttatactgtagaacataaaaaactagtaagttcttcaaattat
ttttattcatttcaattaagtgatattcaaaaaaacaaagagtttataattaaaaattta
cataattctcttgttataaatcatttttgtattttggatatttctgaaaatgaaattatt
aatctattatcaaaaaccaacggtgatgaaaaggacaaaaacattgtatatcaacctttg
aactttgaatttgaaataaaagatgagcttgaaaaaacattaattaataatacaaataat
ttacttaaatcttgttattttgagactaaaataaacccatatgttttaccacattttgag
aatgaattaaacatgaattcaaagcaatttttacgttatcttttaaagcaaaaattgact
caaaaattcaatgaaaaaacatttactaaagaatatcaaaaaagactagaatatgagcta
tcaataattgaaaaattaaattttgaagactattttttaattattcaagactatgtaaac
tgagcaaaaaataacaaaattagtattgggccagggcgtggttctgcatcaggttcactt
gttagttttatactcggaattactgaaattgatcctttaaaatatgggctactttttgaa
aggtttttaaatccagaaagggtttcaatgcctgatattgatgttgatgttcaagataac
agaagagatgaagttattgaatatttaatcaagaaatatggcgaaaaaagagtggcaaat
attgttactttttctaccctcggaaagaaatctgcgataagagatgtactaagagtttat
ggtgtttctccatccttaattaatgaaatttctaagtcaattagtgatgaagatataaac
cttgttgaagagtatcaaaaaaaccaaaaatttgctttattaatggcaagaattgaaaat
attaccaacttattaatcactcaaatcgtttataattcaagcaaattagaaggcctttat
agacaaacgggaactcatgccgctggtatagtaattagtcctaaaaatattgaagaaatt
atacctacatattttttatcaaataatgttcaacaagttcaaagtgcaatggaaaatctt
gaaccatttggacttttaaaaatggatattttaggtcttaaaactttaacaacaatccaa
gaaattttagacaaaataaatgaagggaaaaaagaagaatttaagcttaaaaatattaac
ttcaatgacaaaaaaacttttgaacttttaacaagcggacaaactactggaatctttcaa
cttgaaagtccaggaatgataaagacacttcaaaaagttaaggtttcaacatttaatgat
atagttgcggttatctcactttttagacctgggccaatgcttaatttaactacttatgca
agaagaaaacacggcattgaaaaggtacctaaaatttcgcctgaatttgataaaatagtt
gaagaaacttatggcattattgtctatcaagaacagataatgcaaattgctcaaaaagtg
gccaaaatgagttatggtgaagctgacattttaagaagagcaatatcaaaaaagaaactt
gatgaaatggaaagattaaaagaaaaatttatcaaagattctattaaaaataattatcca
aaacaaataagtgaaaaaatatatgctgctattgaagagtttgcatcatatggatttaat
aaagcacatgctgtaagttacgcttatctttcttatcaaatggcatacttaaaagcacat
tttccgcttgaatattatgctgctattatttcatcaaatcgtggttctcaaactaatatt
aataaatatgtaaatgaagcaaaaagcttgaatattagtgttgcatcacctgatattaac
ttctcttcttttgttagtgaaattaaaaatgaaactatttacttaccacttgcaatgatt
aagggaatagggccagaaactattaagaatttagtaaaaaatagaaaagagtatggccct
tataaatcgtttgcacatttttgcatgtgcgtaagtttgattaaaaactttggtattagc
aacatagaaactttaattaaagcaagtgctttaagatgctttaatttatcgcaaaaaaca
atgctacatgagatttcaaatcccaatagttatttaatgctttcattaaaaatgcaaaat
ttagaaaacttaaatcttcttgatatttctacaaaatcaagcgagatagaaattaaaaat
accaaggatgataagattgaagaaattaaagctaatgagattgaatttttaggtcaaagt
tataatacaaatatattacaaagttgagaaaaaattggttctcaattaaaagacttacac
ttcggaaatagttatgttgttgtagttgaatgcgaaaatgttttaaaaagagttgcaaga
aacggcaaagatttttacatcttaactctttcagatagtagtcaaaaacttcaagtattt
gcatttaatgcaacagaagatttaattaaatttaagaataaaattattgaagctgaaatt
attttaaaaagtgatggaagacacaaacttactaaaattaaagaatattttgtaactaaa
ggataa
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