Metamycoplasma subdolum: R9C05_01040
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Entry
R9C05_01040 CDS
T09522
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
msud
Metamycoplasma subdolum
Pathway
msud03030
DNA replication
msud03430
Mismatch repair
msud03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
msud00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
R9C05_01040 (holA)
03430 Mismatch repair
R9C05_01040 (holA)
03440 Homologous recombination
R9C05_01040 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
msud03032
]
R9C05_01040 (holA)
03400 DNA repair and recombination proteins [BR:
msud03400
]
R9C05_01040 (holA)
Enzymes [BR:
msud01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
R9C05_01040 (holA)
DNA replication proteins [BR:
msud03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
R9C05_01040 (holA)
DNA repair and recombination proteins [BR:
msud03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
R9C05_01040 (holA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_delta
DNA_pol3_delta_C
HP_1247_M
Glyco_transf_61
DUF1825
Motif
Other DBs
NCBI-ProteinID:
WPB50719
LinkDB
All DBs
Position
246635..247597
Genome browser
AA seq
320 aa
AA seq
DB search
MYLLKGDENYFLDENLKKIVQEIKENLNEEVEIYHFSFKVNIEELIGAIENSDIFSSPRI
VILRNCDFMNEKSKVNQKVSEDIIKLLSYVSDDTHIIFTQYVEKFDKNFVPSEIFDFVLK
NAEVIECNKMNEKMLFNFVLNYVKKQCGEIDEMALATLISNLPNDLSIIISEANKLLSEN
KYITLTMVENSSFSLSSKIDFAFLDALIKFESFSEILKKFNEQVNFGQSSAIIISQIAKT
LSDAQTIYFYKKDKTKIEDICQRMQIHQYRLKLLNNFLIRVTYEKIKIWIQELSKLDQEI
KLGIVDENIGLETFIVNLFK
NT seq
963 nt
NT seq
+upstream
nt +downstream
nt
atgtatttacttaaaggcgatgaaaattatttcttggatgaaaatttaaaaaaaattgtc
caagaaattaaagaaaatttaaatgaagaagtggaaatttaccatttttcttttaaagtt
aatattgaagaacttataggtgcaattgaaaacagtgacattttttcatctcctagaatt
gtgattttaagaaattgtgatttcatgaatgaaaaaagtaaagttaatcaaaaagttagc
gaagatatcattaagcttttaagctatgtttcagacgacacacacataatttttacgcag
tatgttgaaaaatttgacaaaaattttgttccatctgaaatttttgactttgttttaaaa
aatgcagaagtaatagaatgcaacaaaatgaatgaaaaaatgctttttaattttgttttg
aattacgtgaaaaagcaatgtggtgaaattgatgaaatggcacttgcaactttaatttcg
aatttacctaatgatctttctattattattagtgaagcgaataaacttttaagtgaaaat
aaatatataactttaaccatggttgaaaatagttcattttcactttcttcaaaaattgat
tttgcttttcttgatgcattgattaaatttgaatcattttctgaaattttaaaaaaattc
aatgaacaagtaaattttggtcaaagttcagcgataattattagtcagattgctaaaact
ttatctgatgctcaaaccatttatttttacaaaaaagacaaaactaaaattgaagatatt
tgtcaaagaatgcaaattcatcaataccgcttgaaacttttaaataactttttaatcagg
gtaacatatgaaaagattaaaatttgaatacaagaactttcaaaacttgatcaagaaatt
aaacttggaatagttgatgaaaatattgggcttgaaacttttattgttaatttatttaaa
taa
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