Metamycoplasma subdolum: R9C05_01755
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Entry
R9C05_01755 CDS
T09522
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
msud
Metamycoplasma subdolum
Brite
KEGG Orthology (KO) [BR:
msud00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
msud03032
]
R9C05_01755 (topA)
03400 DNA repair and recombination proteins [BR:
msud03400
]
R9C05_01755 (topA)
Enzymes [BR:
msud01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
R9C05_01755 (topA)
DNA replication proteins [BR:
msud03032
]
Prokaryotic type
DNA Topoisomerases
R9C05_01755 (topA)
DNA repair and recombination proteins [BR:
msud03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
R9C05_01755 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim
Zn_ribbon_Top1
Toprim_4
Toprim_2
DUF5693
Motif
Other DBs
NCBI-ProteinID:
WPB50313
LinkDB
All DBs
Position
385044..386894
Genome browser
AA seq
616 aa
AA seq
DB search
MAYTKVMIVESPNKVATIQKYVGKDVQVLSSVGHILKLSTSGEKGLGIDLQNWEPRMIVD
KSKSKTIKELREATRKASEVLIATDPDREGEAIAQNLVDTLKVNDKYKRIKYNEITEEAI
KNALENPIMIDIDLVKAQKARRMLDRIIGFELSQLMKKKVKNAPTNPSAGRVQSIALKLV
CDKEKEIEAFIPILYSKIEAKIAEDVNATFYYLNHKDFADDATWIKPEKSKQILDELNKD
KRLKVSNFEITQRKDKQITPFKQSVLYKEAKYSSTVVQVTAQKLFERGLISYPRTDSTRL
NDSFIAKVRKFIEENYGQNYIANDIKSFSGAQDAHEAIRPTDIYLNPSLAKSKFRLNEEE
NYIYELIYNKTLSAIMQVPIREIYHYDLISSSGHNFRMSYSRIIFDGYYKLTKNYEASKV
LPNYKNGDILDVQEFEKLDKETQPPALYNEGSLIKMLDDIKVGRPSTFASTVKVIKSRLF
VENKNGALHPTEFGKTVMSKLIDGFPTIMNEEYTASVENDLDLIAEGKEDYKSLMSEFYS
RFNVTLDEATKTIEIAIMPEETIDESCPDCGNKLMYRYTKATREKFIGCTNFPACRYTRD
VAGKKRKFWRFKRSTK
NT seq
1851 nt
NT seq
+upstream
nt +downstream
nt
atggcttacactaaggtcatgattgtagaatcaccgaataaagttgcaacaattcaaaaa
tatgttggaaaggatgttcaagttctttcaagtgttggacatattttgaaactttcaaca
agtggagaaaaaggtttaggtattgatttacaaaactgagaacctcgtatgattgttgat
aaaagtaaatcaaaaactataaaagaattgagagaagcaactagaaaagcaagtgaagtt
ttaatcgcaactgaccccgatcgtgaaggtgaagctattgcccaaaatttagttgacaca
ttaaaagttaatgataaatacaaaagaattaaatataatgaaattactgaagaggcaatt
aaaaatgctcttgaaaatccaataatgattgacattgatttagttaaagcacaaaaagca
agaagaatgcttgatcgtattattggatttgaactttctcaacttatgaagaaaaaagta
aaaaatgcaccaacaaatccatcagccggaagagtgcaatcaattgctttaaaattagtg
tgcgataaggaaaaagaaattgaagcatttattccaattttgtattcaaaaattgaagca
aaaattgctgaagatgttaatgcaactttctactatttaaatcacaaagattttgcagat
gatgcaacttgaattaaacctgaaaaatcaaaacaaattcttgatgaactaaataaagat
aaaagattaaaagtttcaaactttgaaataactcaaagaaaagataaacaaataacacct
tttaaacaatcagttttatataaagaagcgaagtattcttcaactgttgttcaagtgact
gcacaaaaactttttgaacgtgggcttatctcatatccaagaacagattcaacaagactt
aatgattcttttattgctaaagttagaaaatttattgaagaaaattatggtcaaaactat
attgcaaatgacatcaaaagtttctcaggagcacaagatgctcatgaggcaattagacca
acagatatttacttaaatccaagtttagcaaaatcaaaattccgcttaaatgaagaagaa
aattacatttatgagttaatttataacaagacactttcagcaataatgcaagttcctatt
cgtgaaatttatcactatgatttaataagttcatcaggtcacaattttagaatgagttat
tcaagaattatttttgatggatattataaattaaccaaaaattatgaagcttctaaagta
ttaccaaattataaaaatggtgacattttagatgttcaagagtttgaaaaactagataaa
gaaactcagccacctgcactttacaatgaaggttctttaattaaaatgttagacgatatt
aaagttggacgtccttcgacttttgcatcaacagttaaagtaattaaaagtagacttttt
gttgaaaataaaaatggagcacttcaccctactgaatttggtaaaaccgttatgagcaaa
ttaattgatggtttcccaacaataatgaatgaggaatatacagcatcagtagaaaatgat
cttgacttaattgctgaaggaaaagaagattataaatctttaatgtcagaattctatagt
cgctttaatgttactttagatgaagcaaccaaaacaattgaaattgcaataatgcctgaa
gaaacaattgacgaaagttgccctgattgcggaaacaaactgatgtaccgttatacaaaa
gcaacgcgtgaaaaattcatcggttgcactaattttccagcatgtagatacacaagagat
gttgctggaaagaagagaaaattttgaagatttaaaagaagcacaaaataa
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