Metamycoplasma subdolum: R9C05_01985
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Entry
R9C05_01985 CDS
T09522
Name
(GenBank) DNA-directed RNA polymerase subunit beta
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
msud
Metamycoplasma subdolum
Pathway
msud03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
msud00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
R9C05_01985
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
msud03021
]
R9C05_01985
03400 DNA repair and recombination proteins [BR:
msud03400
]
R9C05_01985
Enzymes [BR:
msud01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
R9C05_01985
Transcription machinery [BR:
msud03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
R9C05_01985
DNA repair and recombination proteins [BR:
msud03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
R9C05_01985
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpb2_45
RNA_pol_Rpb2_1
RNA_pol_Rpb2_2
mTERF
Motif
Other DBs
NCBI-ProteinID:
WPB50351
LinkDB
All DBs
Position
complement(432301..435891)
Genome browser
AA seq
1196 aa
AA seq
DB search
MANKSHYEIRKFGPITLRRDYSISQKKFETPDFLEMQRNSVEKFLKQDIETELKNIYPIE
IPGKVRIEYVAKSAYFEHPKKSEFECIREAKQKGSSYVGKLKAKLRQINVETGEIDEAEV
VFAEIPIMTYGGSFIINGSEKVIVSQLIRSTGAYFGVGVRNKQANDLFNKVEIIPQVGSW
VEIYHKITTHNPDAVRIHIDKNKSFYLTTFLKALGFSKEGIYEIFGKIPELVETFKRDKV
SGSDKEEITRDAQEVIYRLIRKGDRMTAEGAKNLIPSTLFNEKRYSLTETGRFTLNRKLN
VIERIANSYLAQDIISKDGKVLYKAKTYVTQDLAKQIHEDFKSGLIPLYPLPDIDEDVYG
NQLEVEGNEKLAKRLSVARIFIYSTENEMNLDRKVQVLGNDPTADENFLLVPDLVATISY
YFNLIQKVGMDDDPDSLINKRIVTIGELLQNQFRVGLIKLEKNTRERIATKDIDKITPKN
ATNNKPIFNQFKSFFNTSKLSQFMDQCNPLAEMSNKRRITSLGPRGLNRDTAQFEVRDVH
PTHFGRICPIETPEGPNIGLILNLASFAKIDRFGFLQSPYFRVKNRHVDFSEPIYLTAIE
EIGYTFTQSTIHIDKKGYITDDFVMARKNNEYMEVKAEDVDYVAASNRQMTSIAASAIPF
LENDDANRALMGSNMQRQAVPVLSPEAPLVATGVEADVAKYSSTNIRALHDGIVTYIDSQ
KIKVQISGSSKTETYFLRTFERSNQGTLIHQTPIVKIGQEIKAGDLLVDGPSMKDGEMAL
GKNVLVGFTTWNGYNYEDAVILSERLVKDDVYTSIHIEEQTIQFRHSKAGEDWLTDDIPN
ASNYSKRFLDENGIVRIGSEVSAGDILVGRTSPKGEENPTPEEKLMAAIFGQKTSSRKDT
SLKVRHGHNGTVVDVEILSRDTGDQLEDGIEKIVKVSIAQKRKIRVGDKMAGRHGNKGVV
SIVLPVEEMPYLEDGTPLDILLNPQGVPSRMNIGQVLELALGSAAKVLGTKFATPIFDGI
THKQVQEILEEAKLDPSGKAYVYSGQTGEKFDNPISVGIMYYLKLYHMVDDKMHARSVGP
YSLITQQPLGGKSQNGGQRFGEMETWAIESYGAANVLQELLTYKSDNINGRNQLYNALSR
GTTLPKLGMPESFNVLAYELRGLGIKLEAHENLDGEDDENEYIETKYNQQFDGGSE
NT seq
3591 nt
NT seq
+upstream
nt +downstream
nt
atggcaaacaaatcacattatgaaataagaaagtttggaccaataaccttaagacgagac
tactcaattagtcaaaagaaatttgaaactcctgattttctagagatgcaaagaaattca
gttgaaaagtttttaaaacaagatattgaaactgagcttaaaaacatttatccaattgaa
attcctggaaaagtaagaattgaatatgttgctaaatcagcatattttgaacatcctaaa
aaatcagaatttgaatgtattcgtgaagctaaacaaaaaggttcatcttatgttggaaaa
cttaaagcaaaactaagacaaattaatgttgaaactggtgaaattgatgaagcagaagtt
gtttttgctgaaattcctatcatgacttatggtgggtcttttatcattaatggttctgaa
aaagttattgtttctcaacttattcgttcaaccggagcttactttggagttggcgtaaga
aacaaacaagcaaacgacttatttaacaaagttgaaatcattcctcaagttggttcatga
gttgaaatttatcacaaaattactactcataatccagatgcagtaagaattcacattgat
aaaaacaaatcattttatttaacaacttttctaaaagcacttggttttagcaaggaagga
atttatgaaatttttggaaaaattcctgaacttgttgaaactttcaaaagagataaagtt
agcggaagcgacaaagaagaaattactcgcgacgctcaagaagttatctaccgcttaatt
agaaaaggggatagaatgactgctgaaggagcaaaaaatttaattccttcaacactattt
aacgaaaaacgttattcattaacagaaactggaagatttactttaaaccgtaaattaaat
gttattgaaagaattgctaactcatatcttgctcaagatattatttcaaaagatggcaaa
gtgttatataaagcaaaaacttatgtaactcaagatttagcaaaacaaattcacgaagat
tttaaatcaggtcttattcctctttatcctttaccagatattgatgaagatgtttatgga
aatcaacttgaagtagaaggaaatgaaaaactagcaaaacgtctttcagttgctagaatc
tttatttattcaacagaaaatgaaatgaacttggacagaaaagtgcaagttttaggtaac
gatcctactgctgatgaaaacttccttttagttccagatttagttgcaacaatttcatac
tatttcaacttaattcaaaaagttggaatggatgatgatccagattcacttattaataaa
agaatcgttacaattggtgaacttttacaaaatcaatttagagtaggtttaattaaactt
gaaaaaaatacaagagaaagaattgctacaaaagatattgataaaattacacctaaaaat
gcaacaaataacaaacctattttcaatcaattcaaatcatttttcaatacctcaaaactt
tcacaatttatggatcaatgtaatccattagctgaaatgtcaaacaaaagaagaatcact
tcacttggaccacgtggtcttaatagagacactgctcaatttgaagttcgtgacgttcac
cctactcactttggacgtatttgtccaattgaaactccagaaggaccaaacatcgggctt
atcttaaacttagcttcatttgcaaaaattgaccgcttcggatttttacaaagcccatac
tttagagttaaaaatcgtcacgttgatttttcagaacctatttatttaactgctattgaa
gaaattggttatacctttactcaatcaactattcatattgataaaaaaggttatattact
gatgactttgttatggcaagaaaaaataatgaatatatggaagttaaagctgaagatgtt
gattatgttgctgcaagtaacagacaaatgacatcaattgctgcttctgctatccctttt
ctagaaaatgacgatgctaaccgtgccctaatgggttcaaacatgcaaagacaagcagta
ccagttttaagtccagaagcaccacttgttgcaactggagttgaagctgatgttgctaaa
tattcttcaaccaacataagagcacttcatgatggaattgttacttatattgattcacaa
aaaattaaagttcaaattagtggaagtagtaaaactgaaacttatttcttaagaactttc
gaacgttcaaatcaaggaactttaattcatcaaactccaattgtaaaaattggacaagaa
ataaaagctggcgatcttttagttgatggaccttcaatgaaagatggagaaatggcactt
ggtaaaaacgttttagtaggttttactacttgaaatggttataactatgaagatgctgtt
attctttcagaaagacttgtaaaagatgatgtttatacctcaattcatattgaagaacaa
acaattcaatttagacattcaaaagcaggtgaagattgattaaccgatgatattccaaat
gcaagtaactattcaaaacgtttcttagatgaaaatggaattgtaagaattggatcagaa
gttagtgcaggagatattttagttggaagaactagtcctaaaggtgaagaaaacccaact
cctgaagaaaaactaatggcagcaattttcggtcaaaaaacttcatcaagaaaagacact
tctttaaaagtaagacacggtcataatggaacagttgttgatgttgaaattttaagccgt
gatactggtgatcaacttgaagatggaattgaaaaaatcgttaaagtatcaattgctcaa
aaacgtaaaatcagagtcggcgacaaaatggctggtcgtcatggaaacaaaggtgttgtt
tcaatcgtacttccagttgaagaaatgccttatttagaagatggaacaccactggatatt
ttacttaatcctcaaggtgtaccttctcggatgaacattggtcaagttcttgaacttgca
cttggaagtgcagccaaagttttaggcacaaaattcgcaacccctatttttgatggaatt
actcacaaacaagttcaagaaattcttgaagaagcaaaacttgatccatcaggaaaagct
tatgtttatagtggacaaactggcgaaaaatttgataatcctatctcagttggaatcatg
tattatctaaaactttaccacatggttgatgacaaaatgcacgctcgtagtgttggacct
tactcacttattactcaacaaccacttggtggaaaaagccaaaatggtggacaaagattt
ggtgaaatggaaacttgagcaatcgaatcttatggtgcagccaatgttttacaagaactt
ttaacttacaaatcagataacatcaatggacgtaatcaactttacaacgcactttcaaga
ggaacaacattaccaaaacttggtatgcctgaatcattcaacgttctagcttatgaactt
agaggacttggaattaaacttgaggctcatgaaaatcttgatggtgaagatgatgaaaat
gaatacattgaaactaaatacaatcaacaatttgatggagggagcgaataa
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