Metamycoplasma subdolum: R9C05_02165
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Entry
R9C05_02165 CDS
T09522
Symbol
mutM
Name
(GenBank) DNA-formamidopyrimidine glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
msud
Metamycoplasma subdolum
Pathway
msud03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
msud00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
R9C05_02165 (mutM)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
msud03400
]
R9C05_02165 (mutM)
Enzymes [BR:
msud01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
R9C05_02165 (mutM)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
R9C05_02165 (mutM)
DNA repair and recombination proteins [BR:
msud03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
R9C05_02165 (mutM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
zinc-ribbons_6
A2M_recep
C1_2
Motif
Other DBs
NCBI-ProteinID:
WPB50387
LinkDB
All DBs
Position
complement(472354..473181)
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AA seq
275 aa
AA seq
DB search
MPELAEVRVVCDALNKTIKNKKIVEIKIFKSKLFKEKSVQEFKEILTDKTILKVENKGKH
IIIYLNENLVLLSHLRMEGKYRFYNKGEENFDTHLICTFHFKDGSYLNYLDSRMFGTFHL
RNLQNYDKILPLSKVANEPKNVDINNLYEKIKKSTSSIKTKLLDQTLVSGIGNIYIDEAL
FLAKVHPETKANRISRDELKEIIDFSAEVMQKSYEYGGTTLFSYESMNSLEGKYQELLKV
HNDKIKNCSICKSKIEKIKVNGRMSYFCPNCQKRK
NT seq
828 nt
NT seq
+upstream
nt +downstream
nt
atgccagaattagctgaagttagagtagtttgcgacgccttaaataaaacaattaaaaac
aagaaaattgttgaaattaaaatttttaaatctaaactttttaaagaaaaatcagttcaa
gaattcaaggaaattttgaccgacaaaaccattttaaaagttgaaaataaaggcaagcat
attatcatttatttaaacgaaaatttagttttactttctcatttaagaatggaaggaaag
tatcgtttttataataaaggtgaagaaaattttgacactcaccttatatgcactttccat
tttaaagatggatcatatttaaattatttagattctagaatgttcggaacattccattta
agaaacttacaaaactatgacaaaattttacctttatcaaaagttgcaaatgaacctaaa
aatgttgacattaataatctctacgaaaagattaaaaaatcaacatcctcaattaaaaca
aaacttttagatcaaacattagtttctggaattggaaatatttatattgatgaagcacta
tttttagcaaaggttcatcctgaaacaaaagcaaatagaataagtagagatgaattaaaa
gaaattattgatttttcagcagaagttatgcagaaaagttatgagtatggcggaactaca
ttatttagttatgaatcaatgaatagtcttgaaggaaaatatcaagaactattgaaagtg
cacaatgataaaataaaaaattgttctatatgcaagagcaaaattgaaaaaataaaggtc
aatggaagaatgagctatttttgtccaaattgtcaaaaaagaaaataa
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