Metamycoplasma subdolum: R9C05_02535
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Entry
R9C05_02535 CDS
T09522
Name
(GenBank) UvrD-helicase domain-containing protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
msud
Metamycoplasma subdolum
Pathway
msud03420
Nucleotide excision repair
msud03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
msud00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
R9C05_02535
03430 Mismatch repair
R9C05_02535
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
msud03400
]
R9C05_02535
Enzymes [BR:
msud01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
R9C05_02535
DNA repair and recombination proteins [BR:
msud03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
R9C05_02535
MMR (mismatch excision repair)
Other MMR factors
R9C05_02535
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
AAA_12
PcrA_UvrD_tudor
Helicase_RecD
Motif
Other DBs
NCBI-ProteinID:
WPB50460
LinkDB
All DBs
Position
complement(561950..564136)
Genome browser
AA seq
728 aa
AA seq
DB search
MDINLDTLNLKQKDAVVETEGPIRIIAGAGSGKTRVLTYKVAYLIKNNHVNPSEILALTF
SNKAANEMKQRVQRLLDFVGKNTPIISTFHSMCSKILRQEIHNFNYPNDFQIVDELDQKE
VLRVVYNELGINQTQYTFASIISYIQNQKNDLKTPQDLLKDEETKDDIRAKIYQYYQAHL
DKAHTLDFDDLLLFVYKLFYEPKFANVAKKWESKFKYILVDEFQDTSWLQYKIVKKLAKK
WNNITIVGDPDQTIYSWRNADINIIMNFDKDFVGTKTIKLEQNYRSTKKILTAANNLISK
NKIRLDKKLFTENEEGEDIEFFCGFSDEAEARWIAQKISELKRNRVQLKNIAILFRINSY
SRAIEEALIKENTIYKLFGSIKFYQREEIKDALAYLRVIHDGSEISLLRIINKPSRKIGD
STIEKLLKYAASLKMDLFTCLQTKFKEIQINLKLSNTILKNLAELINNIRWAKRALQINP
IHSTLKELIINRIGYFEEIKSSEEEYEVRMENFLSLISAIEEWEKKNLHGTIDEYLQEIT
LITDRDVEDDAASYVSLMTVHNAKGLEFDYVFVAGLAENIFPLRRAIILNPMKDFSYISK
NIREPENIEALEEERRLAYVALTRTKQKLFLSFSVGQNQKMKNSRFLKEAKIKETSVVSI
AKNFTLGKEINKNDNLIVGDYIAHQTFGKGVILNLSGRILEIKFLEDKKVRKIDRLHPAI
KKWEESDV
NT seq
2187 nt
NT seq
+upstream
nt +downstream
nt
atggatattaatttagatacattaaatttaaaacaaaaagatgctgttgtcgaaaccgaa
ggacccattagaattattgctggtgctggtagtggtaagaccagagttttaacctataaa
gttgcatacttaattaaaaataatcacgtgaatccttctgaaattttagctttgactttt
tctaataaagcggcaaatgaaatgaaacagagggtgcaaagattgcttgattttgttgga
aaaaacacaccaataatttcaacctttcattcaatgtgttcaaaaattttaagacaagaa
attcataattttaattatccaaatgactttcaaattgttgatgaacttgaccaaaaagaa
gtgcttagagttgtttataatgagcttggaattaatcaaactcaatatacttttgcatca
ataatttcatatatccaaaatcaaaaaaatgatttaaaaactccacaagatttattaaaa
gatgaagaaactaaagatgatattagagcaaaaatttatcaatattatcaagcacattta
gataaagcacatacacttgattttgacgatttattattgtttgtttataaattattttat
gaacctaaatttgcaaatgttgccaaaaaatgagaaagtaaatttaaatatattttagtt
gatgaatttcaagatacaagttgacttcaatacaaaatagttaaaaaacttgcaaaaaaa
tgaaacaacattactattgttggtgaccctgaccaaacaatttattcttgaagaaatgct
gatattaacattatcatgaattttgataaagattttgttggaacaaaaactattaaactt
gaacaaaattaccgttcaaccaaaaaaatattaacagcagcaaacaatttaattagcaaa
aacaaaattaggttagataaaaaacttttcaccgaaaatgaagaaggcgaagatattgaa
tttttctgtggtttcagtgatgaagcagaggctagatgaattgctcaaaaaataagtgaa
ttaaaacgcaatagagttcaattaaaaaatatagcaatcttatttagaattaatagttat
tctcgtgctattgaagaagctctaattaaagaaaacactatttataaactatttggttca
attaaattctatcaacgggaagaaattaaagatgcgttagcgtatcttagagtaattcat
gatggctcagaaatttctcttttaagaattattaataaaccaagcagaaaaattggtgat
agcacaattgaaaagctattaaaatatgctgcaagtttaaaaatggatttatttacatgt
ttgcaaactaaatttaaagaaatacaaataaatttgaaattgtcaaatacaattttgaaa
aatttagctgagttaataaataatattcgctgagcaaaaagagcgttgcaaattaatccg
attcactcaactttaaaagagttgattattaaccgtataggttattttgaagaaataaaa
tcatcagaagaagaatatgaagttagaatggaaaacttcttatctttaatatctgctatt
gaagaatgagaaaagaaaaatcttcacggcactattgatgaatatttacaagaaatcact
ttaattactgaccgtgatgttgaagatgatgcggcaagttacgtttctttaatgacagtg
cataatgcgaaagggcttgaatttgattatgtttttgtagcaggacttgctgaaaatatt
tttccattaagaagagcaattattttaaaccctatgaaagattttagttatatttcaaaa
aatataagggaaccagaaaatattgaagcattagaagaagagagaagacttgcttatgtt
gcattaacaagaaccaaacaaaaactttttctttctttttcagtagggcaaaatcaaaaa
atgaaaaattctcgtttcttaaaagaagctaaaattaaagaaacaagtgttgtttcaatt
gcaaaaaactttactttaggtaaagaaataaataaaaatgataatttaattgttggagat
tatatagcacaccaaacttttggcaaaggtgtcattttaaatcttagtggaagaatttta
gagataaaatttcttgaagataaaaaagtgagaaaaattgatagactacatcctgcaata
aaaaaatgagaggaaagtgatgtctaa
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