Microbacterium sufflavum: KV394_01080
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Entry
KV394_01080 CDS
T10224
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
msuf Microbacterium sufflavum
Pathway
msuf03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
msuf00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
KV394_01080
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
msuf03021
]
KV394_01080
03400 DNA repair and recombination proteins [BR:
msuf03400
]
KV394_01080
Enzymes [BR:
msuf01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
KV394_01080
Transcription machinery [BR:
msuf03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
KV394_01080
DNA repair and recombination proteins [BR:
msuf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
KV394_01080
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
HHH_5
RNA_pol_L_2
SAM_EPH
Motif
Other DBs
NCBI-ProteinID:
UPL09780
LinkDB
All DBs
Position
complement(216035..217024)
Genome browser
AA seq
329 aa
AA seq
DB search
MLIAQRPTLTEEKIVENRSRFIIEPLEPGFGYTIGNALRRSLLSSIPGAAVTSVRIDGVL
HEFSTIPGVKEDVTEIILNIKQLVVSSERDEPITAYLRKTGAGEVTAADISAPAGVEVHN
PELVIATLNDTAKFELELTIERGRGYVSATQNRNEYAEAGQIPIDSIYSPVLKVSYRVDA
TRAGERTDFDKLVLDVETKSAISPRDAVASAAKTLTELFGLARELNVEAEGIEIGPAPVE
AVNSNELSMPIEDLDLSVRSYNCLKREGINTVSELVALSETQLMNIRNFGQKSVDEVRDK
LISLGLSLKDSVPGFDGAHFYGGSEDESF
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
gtgcttattgcacagcgtcccacactgaccgaggaaaagatcgtcgagaaccggagccgg
ttcatcatcgagcctctggagcccggcttcggctacacgatcggcaacgcgctgcgccgc
agcctgctgtcgtcgatccccggcgccgctgtcaccagcgtccgtatcgacggcgtgctg
cacgagttcagcaccatccccggcgtgaaggaggatgtcaccgagatcatcctcaacatc
aagcagctggtcgtctccagcgagcgcgacgagcccatcacggcctacctgcgcaagacc
ggtgccggtgaagtgaccgccgccgacatctcggctccggccggtgtcgaggtgcacaac
cccgagctcgtcatcgccacgctcaacgacaccgccaagttcgagctcgagctgacgatc
gagcgcggtcgtggctacgtctcggcgacgcagaaccgcaacgagtacgccgaggcgggc
cagatcccgatcgactcgatctactcgccggtcctcaaggtcagctaccgcgtcgacgcc
acccgtgccggtgagcgcaccgacttcgacaagctcgtcctcgacgtcgagaccaagtcg
gcgatcagcccgcgcgacgccgtcgcctcggccgccaagacgctcaccgagctgttcggt
ctcgcccgcgagctgaacgtcgaggccgagggcatcgagatcggcccggcgcccgtggag
gctgtgaactccaacgagctgtcgatgccgatcgaggacctcgacctgtcggtccgctcg
tacaactgccttaagcgtgagggcatcaacaccgtttcggagctcgtcgccctctcggag
acgcagctcatgaacatccgcaatttcggccagaagtcggtcgacgaggtgcgcgacaag
ctcatctcgctcggtctgtcgctcaaggattcggtgcccggtttcgacggcgcccacttc
tacggcggcagcgaagacgagtccttctga
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