KEGG   Microbacterium sufflavum: KV394_12540
Entry
KV394_12540       CDS       T10224                                 
Name
(GenBank) ribonuclease J
  KO
K12574  ribonuclease J [EC:3.1.-.-]
Organism
msuf  Microbacterium sufflavum
Pathway
msuf03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:msuf00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    KV394_12540
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:msuf03019]
    KV394_12540
Messenger RNA biogenesis [BR:msuf03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     KV394_12540
SSDB
Motif
Pfam: RNase_J_b_CASP RNase_J_C RMMBL Lactamase_B Lactamase_B_2 Anti-Pycsar_Apyc1 YicC-like_C
Other DBs
NCBI-ProteinID: UPL11890
UniProt: A0ABY4IHZ4
LinkDB
Position
2597743..2599419
AA seq 558 aa
MSIPLAEPSALDEGTLRVIPVGGLGEVGRNMTVFEYDGKILIVDCGVLFPEEHQPGVDLI
LPDFEPIRDRLDDIVGVVLTHGHEDHIGAVPYLLRLKSDIPLIGSGLTLALVEAKLKEHR
IKAFTLTVKEGQKERVGPFDLEFVAVNHSIPDALAVAIRTPAGMVLATGDFKMDQLPLDG
RITDLRAFSRLGEEGVDLFLVDSTNADVPGFTPTERSIGPVLDQVIGKAPRRVIVASFSS
HVHRVQQVIDAAHAHGRRVAFLGRSMVRNMTIAEQLGYLKVPAGVLIDFKKARDLPDEQI
VYMSTGSQGEPMAVLSRMANLDHAIEVSEGDTVILASSLIPGNENAVYRVIDGLTKLGAN
VVHKANARVHVSGHAAAGELLYCYNILKPKNVLPVHGEYRHLIANAKLAQDTGIPEENTI
IASNGTVIDLKDGVARVSGQLDLGFVYVDGSTVGEITDADLKDRRILGEEGFISVIVVVD
AATGRIISGPEIHARGVAEDDSVFDDVAPKIVAALKEASGNGVRDTHALSQVVRRTIGRW
VNQKLRRRPMIVPLVIEA
NT seq 1677 nt   +upstreamnt  +downstreamnt
atgtccattcccctggccgaaccgtccgctctcgacgaaggaacgctgcgggtcatcccg
gtcggcggcctcggcgaggtcggccgcaacatgaccgtgttcgagtacgacggcaagatc
ctgatcgtcgattgcggcgtgctgttccccgaggagcaccagcccggcgtcgacctgatc
ctgcccgacttcgagcccatccgcgaccgtctcgacgacatcgtcggcgtggtgctcacg
cacgggcacgaggaccacatcggcgccgtgccgtacctgctgcgcctgaagagcgacatc
cccctgatcggctccggcctgacgctcgcgctcgtcgaggcgaagctcaaggagcaccgg
atcaaggcgttcaccctcaccgtcaaggaggggcagaaggagagggtcgggccgttcgac
ctcgagttcgtggccgtcaaccactccatccccgacgcactcgccgtcgcgatccgcacg
ccggcgggcatggtgctcgcgacgggcgacttcaagatggatcagctgccgctggacggc
cgcatcaccgacctgcgcgcgttctcgcggctgggggaggagggcgtcgacctcttcctc
gtcgactccacgaacgccgacgtccccgggttcaccccgaccgagcgctcgatcgggccg
gtcctcgaccaggtcatcggcaaggctccgcgccgcgtcatcgtcgccagcttttccagc
cacgtgcaccgcgtgcagcaggtgatcgacgccgcgcacgcgcacggacggcgcgtcgcc
ttcctcggtcgcagcatggtgcgcaacatgaccatcgccgagcagctcggctacctcaag
gtgcccgcgggcgtgctgatcgacttcaagaaggctcgcgacctgcccgacgagcagatc
gtctacatgtcgacggggtcgcagggcgagccgatggcggtgctcagccgcatggcgaac
ctcgaccacgcgatcgaggtgagcgagggtgacacggtcatcctcgcctcgagcctcatc
cccggcaacgagaacgcggtctaccgcgtgatcgacggcctcacgaagctcggcgcgaac
gtggtccacaaggcgaacgcgcgggtgcacgtgtccggccacgcggcggcgggtgagctg
ctctactgctacaacatcctcaagccgaagaacgtcctcccggtgcacggggagtaccgc
cacctgatcgccaacgccaagctcgcgcaggacacgggcatcccggaggagaacacgatc
atcgcctccaacggcaccgtgatcgacctcaaggacggcgtggcccgcgtgagcggacag
ctcgacctcgggttcgtgtatgtggacggttcgacggtgggcgagatcaccgacgccgat
ctgaaggaccggcgcatcctgggcgaggaggggttcatctcggtcatcgtcgtggtggac
gcggcgaccggtcgcatcatctccggccccgagatccacgcccgcggcgtggcggaggac
gactcggtcttcgacgacgtcgcgccgaagatcgtcgccgcgctcaaggaggcttcgggc
aacggcgtgcgcgacacgcacgccctctcccaggtcgtgcgccgcacgatcggccgctgg
gtcaaccagaagctccgtcgccgcccgatgatcgtgcccctcgtcatcgaggcctga

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