Microbacterium sufflavum: KV394_12875
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Entry
KV394_12875 CDS
T10224
Name
(GenBank) DNA topoisomerase IB
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
msuf Microbacterium sufflavum
Brite
KEGG Orthology (KO) [BR:
msuf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
msuf03032
]
KV394_12875
03400 DNA repair and recombination proteins [BR:
msuf03400
]
KV394_12875
Enzymes [BR:
msuf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
KV394_12875
DNA replication proteins [BR:
msuf03032
]
Prokaryotic type
DNA Topoisomerases
KV394_12875
DNA repair and recombination proteins [BR:
msuf03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
KV394_12875
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
Motif
Other DBs
NCBI-ProteinID:
UPL11951
LinkDB
All DBs
Position
2664976..2666010
Genome browser
AA seq
344 aa
AA seq
DB search
MARLIRVVPGVDPGFRRQRSGSGFRYVDPTGAPAPEADRERINDLVIPPAWRDVWIAADP
LAHIQAVGIDQADRKQYLYHPLWRVSRDRRKFVRALDLASALPSARAQVTRALREEGQTK
DRALAIAFRLLDDAALRIGSERYLARHGSRGLTTLRRRDVRLDGRDVALSFPAKSGRTAS
IEITDEALAEALTDFAAGASNAFLLAYRKGRRRVKITPAEVNAYLKDVLGASFTAKDFRT
LHGTIIAADALARIGALDRKGQRAQAERLAVQAAATALGNTTAVARNSYIDPRVFRQYAR
GRTLDLDVTPETAIRRLLGGPETSRKVNRRGTSRGRRSAAARAA
NT seq
1035 nt
NT seq
+upstream
nt +downstream
nt
atggcgcggctgatcagggtggtgccgggcgtcgacccggggttccgtcgacagcggtcc
ggctccgggttccgctacgtcgacccgaccggcgcaccggcgcccgaggccgaccgggag
cgcatcaacgacctggtcatcccgcccgcgtggcgcgacgtgtggatcgcggcggacccg
ctcgcgcacatccaggccgtcggcatcgaccaggccgaccgcaagcagtacctctaccac
ccgctgtggcgcgtctcccgcgaccgccggaagttcgtgcgcgccctcgatctggcctcc
gcgctcccgagcgcgagggcgcaggtgaccagggcgctgcgcgaagaggggcagaccaag
gacagggccctcgcgatcgcgttccgactgctcgacgacgccgccctgcgcatcggatcc
gagcggtacctcgcgcgtcacggcagccgtggactgaccacgctgaggcgccgcgacgtg
cgcctcgacggccgcgacgtggcactgtcgttccctgccaagagcggtcgcaccgcctcg
atcgagatcaccgacgaggccctcgcggaggcgctcacggacttcgcggcgggagcctcg
aatgcgttcctgctcgcgtaccgcaaggggaggaggcgtgtgaagatcacgcccgcggag
gtgaacgcgtacctcaaggacgtgttgggggcgagcttcacggcgaaggacttccgcaca
ctgcacggcacgatcatcgccgccgacgccctcgcccgcatcggggcgctcgaccgcaag
ggtcagcgcgcgcaggccgagcggctggccgtgcaggccgccgcgaccgcgctcgggaac
acgaccgccgtggcacgcaacagctacatcgacccgcgcgtgttccggcagtacgcgcgc
ggacgcaccctcgacctcgacgtgacccccgagaccgcgatccgtcgcctcctcggcggt
cccgagacctcccgcaaggtcaaccggcgagggacgtccagagggcggcgatcagcagcg
gcacgagcggcgtga
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