Microbacterium sufflavum: KV394_13295
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Entry
KV394_13295 CDS
T10224
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
msuf Microbacterium sufflavum
Pathway
msuf03018
RNA degradation
Brite
Enzymes [BR:
msuf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
KV394_13295
Messenger RNA biogenesis [BR:
msuf03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
KV394_13295
Ribosome biogenesis [BR:
msuf03009
]
Prokaryotic type
rRNA helicases
KV394_13295
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Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
UPL12915
LinkDB
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Position
complement(2751657..2753492)
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AA seq
611 aa
AA seq
DB search
MPTDAPDESPATPGFEELGITGPVLKAIRDLGYETPSPIQAATIPTLLSGRDVVGMAQTG
TGKTAAFALPVLERLDTAQKTPQALVLAPTRELALQVCEAFESYASRMKGIHVLPVYGGQ
GYGVQLSALRRGVHVVVGTPGRIMDHLAKGTLDLSELQYLVLDEADEMLKMGFAEDVEQI
LAQTPEEKQVALFSATMPAQIRRLAQQYLRDPEEITVKSKTATNTNITQRYLVVSYAQKV
DALTRILEVENFDGMIVFVRTKNETETLAEKLRARGYSAAAINGDVPQVQRERSVNQLKD
GKLDILVATDVAARGLDVERISHVINFDIPTDTESYVHRIGRTGRAGRTGDAISFITPRE
RYLLKHIEKATRQTPTQMQLPTTEDVNTTRLARFDDAITTALSETARIDAFRDIIAHYVR
HHDVPESDVAAALAVVAQGERPLLLDPADDPLARAVAADNRPPRERAPRDARETREPRER
RGRGDYAAYRIEVGRRHRVEPRQIVGALANEGGLGRDDFGAINIRPDFSIVELPANLDPA
VLEKLRDTRISGRLIEIAPDRGPGARRGAARDRGNDDSAGRGYRGDRHDRDDRGPRGPRE
DKPFRKPRHKS
NT seq
1836 nt
NT seq
+upstream
nt +downstream
nt
gtgcccaccgacgcccccgacgagtcccccgcaacccccggattcgaggagctcggcatc
accgggcccgtcctcaaggccatccgagacctcggctacgagaccccctccccgatccag
gccgcgacgatcccgaccctgctgtcgggtcgcgacgtggtgggcatggcgcagaccggt
accggcaagaccgcggccttcgcgctccccgtgctggagcgcctcgacaccgcacagaag
accccgcaggccctcgtgctcgcccccacgcgcgagctcgcgctgcaggtgtgtgaggcg
ttcgagtcgtacgcctcacgcatgaagggcattcacgtgctgcccgtgtacggcggtcag
gggtacggcgtgcagctgtcggcgctgcgccgcggtgtgcacgtggtcgtcggaaccccc
ggtcgcatcatggaccacctcgccaagggcacgctcgacctctcggagctgcagtacctg
gtgctcgacgaggcggacgagatgctgaagatgggcttcgcggaggatgtcgagcagatc
ctcgcccagacgccggaggagaagcaggtcgcgctgttctccgccacgatgcccgcccag
atccggcgcctcgcgcagcagtacctccgcgaccccgaggagatcacggtcaagtccaag
accgcgaccaacacgaacatcacccagcggtacctcgtggtgtcgtacgcgcagaaggtg
gacgccctcacgcgcatcctcgaggtggagaacttcgacgggatgatcgtcttcgtccgc
accaagaacgagaccgagacgctcgcggagaagctccgcgctcgcggctactccgccgcc
gcgatcaacggcgacgtgccccaggtgcagcgcgagcgcagtgtcaaccagctcaaggac
ggcaagctcgacatcctggtcgcgaccgacgtcgccgcgcgcggtctcgacgtggagcgc
atcagccacgtcatcaacttcgacatccccaccgacaccgagtcgtacgtgcaccgcatc
ggtcggaccgggcgcgccgggcggaccggcgacgcgatcagcttcatcaccccgcgcgag
cgctacctgctgaagcacatcgagaaggccacgcgtcagacgccgacgcagatgcagctg
ccgaccacggaggacgtcaacaccacgcgcctcgcgcgcttcgacgacgccatcacgacc
gcgctgtccgagaccgcccgcatcgacgcgttccgcgacatcatcgcccactacgtgcgc
caccacgacgtgccggagagcgatgtcgccgcggctctcgccgtggtcgcgcagggtgag
cgtccactcctcctcgaccccgcggacgacccgctcgcccgagctgtcgccgccgacaac
cgtcctccgcgtgagcgcgcaccgcgcgacgcgcgggagacgcgtgagcccagggaacgc
cggggccgtggcgactatgcggcgtaccgcatcgaggtcggacgacggcaccgcgtggag
ccgcggcagatcgtcggcgcgctcgcgaacgagggcggcctcggtcgcgacgacttcggc
gccatcaacatccgccccgacttctcgatcgtggaactgccggccaacctcgaccccgcc
gtcctcgagaagctccgcgacacccgcatctccgggcggctgatcgagatcgcgcccgac
cgtggccccggggcacgccggggagctgcgcgcgaccgcgggaacgacgacagcgcgggc
cgcggctaccgcggtgaccgccatgaccgtgacgatcgcggaccccgcggtccccgcgag
gacaagccgttccggaagccccgtcacaagagctga
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