KEGG   Methanoculleus submarinus: OH143_00465
Entry
OH143_00465       CDS       T08553                                 
Name
(GenBank) replication factor C small subunit
  KO
K04801  replication factor C small subunit
Organism
msum  Methanoculleus submarinus
Pathway
msum03030  DNA replication
Brite
KEGG Orthology (KO) [BR:msum00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    OH143_00465
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:msum03032]
    OH143_00465
DNA replication proteins [BR:msum03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (archaeal)
    RFC (replication factor C)
     OH143_00465
SSDB
Motif
Pfam: Rep_fac_C AAA DNA_pol3_delta2 RuvB_N Rad17 AAA_assoc_2 AAA_14 RCF1-5-like_lid nSTAND3 AAA_3 AAA_24 AAA_16 MeaB AAA_25 AAA_5 TIP49 Sigma54_activ_2 VapE-like_dom Viral_helicase1 AAA_28 AAA_2 IstB_IS21 AAA_18
Other DBs
NCBI-ProteinID: UYU19761
UniProt: A0AAX3EES2
LinkDB
Position
complement(80148..81116)
AA seq 322 aa
MDGNHTIWIEKYRPRRLDEMVGQKDIVVRLQSYVKTGNLPHLLFTGSAGIGKTTAAVALA
REFFGDSWQTNFREMNASDERGIDVVRNQIKEFARTSPLAGATFKILFLDEADALTTDAQ
AALRRTMETYARTCRFILSCNYSSKIIDPIQSRCAIYRFRPLDREAVIEETRRIAAAEGL
TVTEGALDAIVYVASGDMRKAINALQGAAILRTDIDEETIFEITATARPEEIDELLDLSI
GGRFDEAEQALLELTHVRGIAPNELINQCYRALVQRDIDRTLKVKLIDALGETDFRLSEG
ASSDIQMEALLARFVLAAEQHR
NT seq 969 nt   +upstreamnt  +downstreamnt
atggacggcaaccacaccatctggatagagaagtatcggcccagaagactcgacgagatg
gtcggacagaaggatatcgtggtgcgcctccagtcctacgtgaagaccggcaacctgccg
cacctcctcttcacgggcagcgcggggatcgggaagaccaccgccgccgtggcgctcgcc
cgggagttcttcggcgactcctggcagacgaacttccgggagatgaacgcctccgacgag
cggggtatcgacgttgtcagaaaccagatcaaggagttcgcccggacgtcgccgcttgcc
ggggcgacgttcaagatcctcttcctcgacgaagcggacgcgctgacgacggacgcgcag
gcggctctccggcggacgatggagacctacgcccgcacctgccggttcatcctctcgtgc
aactactcatcgaagatcatcgatcccatccagagccggtgcgccatctaccggttcagg
ccgcttgaccgggaagcggtcatcgaggagacccggaggatcgccgcggccgaagggctc
acggtcacggagggggcgctcgatgccatcgtctacgtcgcctcgggggacatgaggaag
gcgatcaacgccctgcagggtgccgccatcctcaggacggatatcgacgaggagactatc
ttcgagatcaccgcgaccgcccgcccggaggagatcgacgaactcctcgacctctcgata
ggggggaggttcgacgaggcggagcaggcgctcctggaactgacccatgtccggggcatc
gccccgaacgagctgatcaaccagtgctaccgggcgctggtccagcgcgatatcgaccgg
acgctcaaagtgaaactgatcgacgccctcggcgagaccgatttccgcctctcggaaggg
gcgagcagcgatatccagatggaggcgctgctcgcacggttcgtcctcgccgcagagcag
caccgctga

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