Methanoculleus submarinus: OH143_00485
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Entry
OH143_00485 CDS
T08553
Name
(GenBank) TATA-box-binding protein
KO
K03120
transcription initiation factor TFIID TATA-box-binding protein
Organism
msum
Methanoculleus submarinus
Pathway
msum03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
msum00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
OH143_00485
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
msum03000
]
OH143_00485
03021 Transcription machinery [BR:
msum03021
]
OH143_00485
Transcription factors [BR:
msum03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
TATA-binding proteins
OH143_00485
Transcription machinery [BR:
msum03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
OH143_00485
RNA polymerase III system
TFIIIB
OH143_00485
RNA polymerase I system
SL1/TIF-1B
OH143_00485
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TBP
DUF3378
Motif
Other DBs
NCBI-ProteinID:
UYU18598
UniProt:
A0AAX3E913
LinkDB
All DBs
Position
complement(86102..86656)
Genome browser
AA seq
184 aa
AA seq
DB search
MDEKGYESLKIENIVASGVIADAIDLENVSDKIKNCELNTKRFPGAVYRIEKPKIASLIF
SSGKVVLTGIRNNQDLHEGLGIIMQSLRDAGVNTYDEPQVAVTNIVCSYDMGKYINLNKV
VITLNLENIEYEPEQFPGLVYRIEDPKIVALLFSSGKIILTGGKTVEDIKRGLDFLEQRL
ETIM
NT seq
555 nt
NT seq
+upstream
nt +downstream
nt
atggatgagaagggatacgagtcactgaaaattgagaacatcgttgcctccggggtgatt
gccgacgcgatcgacctcgaaaacgtatctgataaaataaaaaactgcgaactgaatacg
aagaggttccccggggcggtctaccgcatcgagaaacccaagatcgcatccctgatattt
tcctcgggaaaagtggtgctcaccggtatcaggaacaaccaggacctgcatgaaggcctc
ggtatcatcatgcagtcgctccgcgatgccggggtcaatacctacgacgagccgcaggtc
gcggtcacgaacatcgtctgttcgtacgacatgggcaagtacatcaacctgaacaaggtg
gtcatcaccctcaacctcgagaacatcgagtacgaacccgagcagttcccggggctcgtc
taccgcatcgaggacccgaagatcgtcgcccttctcttcagctccggcaagatcatcctg
accggcgggaagaccgtcgaggatatcaagagaggacttgatttcctggagcagcggctc
gaaaccataatgtaa
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integrated database retrieval system
