KEGG   Methanoculleus submarinus: OH143_01165
Entry
OH143_01165       CDS       T08553                                 
Name
(GenBank) TATA-box-binding protein
  KO
K03120  transcription initiation factor TFIID TATA-box-binding protein
Organism
msum  Methanoculleus submarinus
Pathway
msum03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:msum00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    OH143_01165
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:msum03000]
    OH143_01165
   03021 Transcription machinery [BR:msum03021]
    OH143_01165
Transcription factors [BR:msum03000]
 Eukaryotic type
  beta-Scaffold factors with minor groove contacts
   TATA-binding proteins
    OH143_01165
Transcription machinery [BR:msum03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIID
     OH143_01165
  RNA polymerase III system
    TFIIIB
     OH143_01165
  RNA polymerase I system
    SL1/TIF-1B
     OH143_01165
SSDB
Motif
Pfam: TBP DUF7433
Other DBs
NCBI-ProteinID: UYU18728
UniProt: A0AAX3E9M8
LinkDB
Position
complement(237562..238125)
AA seq 187 aa
MNEHRPEESLKIENIVASAKVTDSLDLPSLASRLKDAEYNKKRFPGVVLRMQDPKIAALV
FGSGKVVLTGAKSIDNLSRGLQILADQLRALDIDIPENPEYKIQNIVTSADLGTPINLNK
IAVGFNLDKIEYEPEQFPGLVYRLDDPKVVVLLFGSGKLIITGGKVPEDAQRAVKRILSE
LSSLGLI
NT seq 564 nt   +upstreamnt  +downstreamnt
atgaatgagcacagaccagaggagtccctcaagatagaaaatatcgtcgcttccgcgaaa
gtgacggattctcttgatctgccttctcttgcttcccggctgaaggacgcggaatacaat
aaaaagcggttccccggcgtcgttctccggatgcaggacccgaaaatcgccgcgctcgtc
ttcggttccggcaaggtcgtcctgaccggtgcaaagagcatcgacaacctctcccggggc
ctgcaaatcctcgccgatcagttgcgggcgctcgacatcgacatccccgagaaccctgag
tataagatccagaacatcgtcacgtccgcagacctcgggacgccgatcaacctcaataag
atcgccgtgggcttcaatctggacaagatcgagtacgagcccgaacagttccccgggctc
gtataccggctcgacgaccccaaggtggtcgtcctcctgttcgggtccggcaaactgatc
atcacgggcggcaaggtgcccgaggatgcccagcgtgcggtaaagcggattctctccgaa
ctctccagtctcggtctcatctga

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