Methanoculleus submarinus: OH143_01215
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Entry
OH143_01215 CDS
T08553
Symbol
truD
Name
(GenBank) tRNA pseudouridine(13) synthase TruD
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
msum
Methanoculleus submarinus
Brite
KEGG Orthology (KO) [BR:
msum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
msum03016
]
OH143_01215 (truD)
Enzymes [BR:
msum01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
OH143_01215 (truD)
Transfer RNA biogenesis [BR:
msum03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
OH143_01215 (truD)
Prokaryotic type
OH143_01215 (truD)
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Ortholog
Paralog
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GFIT
Motif
Pfam:
TruD
Motif
Other DBs
NCBI-ProteinID:
UYU18738
UniProt:
A0AAX3E934
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All DBs
Position
complement(246886..248157)
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AA seq
423 aa
AA seq
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MMPSPHPLEQELGMRYYASDAPGIGGRLRVSPADFVVEELPLPISDQNGPHLICLLTKTN
WELQRAVKEIAKRLGISHRRIAWAGTKDKNAVTTQFISIYNVTPEAVEQVHLADISLEVV
GRSQHPLSLGSLAGNRFDIVIRDCIEDGLPARVQAATEVASAGIPNYYGLQRFGVVRPVT
HLVGERILKGDYEGAVAIYIGRAYPRESEEAQRARTHFTETHDARAALADLPIWMTYERA
MANHLVANPGDYAGALRALPPKLLSLLVSAYQSYLFNCALSSRIDAGMSLTEPEIGDRLL
FENSREDIVSARNRQAALMHVRRGRCRIALFIPGSGQVTSRGPMDEMMQELMIESGIDAG
DFERASRFVETAFSGVLRPISLSADVETEVSGADVRLKFTLPPGHYATTVCREYMKADPY
MMI
NT seq
1272 nt
NT seq
+upstream
nt +downstream
nt
atgatgccctcgccccatcccctcgagcaggaactcgggatgcgctactacgcgtccgat
gcccccggtatcggcggccggctccgcgtaagccccgccgacttcgtcgtcgaggaactc
ccgctcccgatcagcgaccagaacggcccgcacctcatctgcctgctcaccaagacgaac
tgggaactccagcgggcggtcaaggagatcgcaaaacggctcggcatcagccaccggcgg
atcgcctgggcggggacgaaggacaagaacgcggtgaccacccagttcatatcgatctac
aacgtcacgccggaggccgttgaacaggtgcaccttgcggacatctcgctcgaggtcgtc
gggcggtcgcagcacccgctctccctcggcagcctcgcgggcaaccggttcgatatcgtc
atccgcgactgcatcgaagacggcctcccggcgcgggtgcaggcggcgacggaggtggcg
tccgccgggataccgaactactacgggctgcagcggttcggcgtcgtccggccggtcacg
catctggtcggcgagaggatcctcaagggcgattacgaaggcgccgtggccatctacatc
ggccgggcctacccccgggagtcggaggaggcacagcgcgcccggactcatttcaccgag
acccacgatgcacgggcggcgctcgccgacttacccatatggatgacctacgagcgggcg
atggcgaaccacctcgtcgcgaaccccggcgactacgccggcgcgctccgggcgctcccc
ccgaaactcctctcgctcctcgtgagcgcataccagtcctacctcttcaactgcgcgctc
tcctcccgcatcgatgccggcatgtcgctcaccgagcccgagatcggcgaccggctcctc
tttgagaacagccgcgaggatatcgtctccgcgcggaaccggcaggcggccctgatgcat
gttcgccgcggccggtgccggatcgccctcttcattccgggctctggacaggtgacatcg
cgcgggccgatggacgagatgatgcaggaactgatgatcgagtcgggtatcgacgccggg
gacttcgagcgcgcctcccggttcgtggagacggcgttttccggggtgctccggccgatc
agcctctccgccgacgtggagacggaggtatccggtgcggatgtccggctcaaattcacg
ctccctcccggccactacgcgacgacggtctgccgggaatacatgaaggccgacccctac
atgatgatctag
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