Methanoculleus submarinus: OH143_01410
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Entry
OH143_01410 CDS
T08553
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
msum
Methanoculleus submarinus
Pathway
msum03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
msum00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
OH143_01410 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
msum03019
]
OH143_01410 (recQ)
03400 DNA repair and recombination proteins [BR:
msum03400
]
OH143_01410 (recQ)
Enzymes [BR:
msum01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
OH143_01410 (recQ)
Messenger RNA biogenesis [BR:
msum03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
OH143_01410 (recQ)
DNA repair and recombination proteins [BR:
msum03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
OH143_01410 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
Helicase_C
RecQ_Zn_bind
HRDC
ResIII
P-II
Motif
Other DBs
NCBI-ProteinID:
UYU18776
UniProt:
A0AAX3EA40
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All DBs
Position
286937..288754
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AA seq
605 aa
AA seq
DB search
MDAKHTALEKYFGYTSFLPHQEEIVDAVLAGRDVLAVMATGGGKSLCYQLPALVFGGLTV
VVSPLIALMKDQVDGLRANGIPAATINSSLGYGEQKIVERVILEGRIRILYVSPERAVQP
FFLSLIAKADVRLIAIDEAHCISMWGHNFRPEYRRLRVLKERFPTVPVIALTATAIPAVQ
NDIAVELALSNPARFVGSFNRKNLTYRVVPKARYFPRLVAYLNEHKNDAGIIYCFSQKAT
VELAKKLQDKGFSALPYHAGLPDAVRAEHQEAFSRGDVAIICATVAFGMGIDKPDVRFVI
HTDLPKDIESYYQETGRAGRDGEPGDCILYYSRGDYGTIRYIIEKEGADATQKDVAYRKV
GAMLDYCETPGCRRKFLLAYFGESYPEERCGACDRCETPVKVFDGTEVAAAVIACIRETG
ERFGASYIADVLAGSKSARVRENGHDRLSAYGSGRGYTRDQWLLFIQEMVGKGFVASTGG
RYPVLVSNDRSRAVLAGKNPVPLAEPRPEGVVAPETGEKDYDEPLFLRLRRLRKVVADLD
HVPPFVVFHDRSLKEMATYYPTTGVALLEIYGVSEAKLKRYGRKFLDAIDKHCAEHGIGP
EQRRG
NT seq
1818 nt
NT seq
+upstream
nt +downstream
nt
atggacgcaaaacacactgctctggagaaatatttcggttacacgtcgttcctcccccac
caggaagagatcgtcgacgccgtcctcgccgggcgcgacgtcctcgccgtcatggcgacc
ggaggcggcaaatccctctgctaccagctccccgccctcgtcttcggcgggcttacggtc
gtcgtctcgccgctcatcgccctgatgaaggatcaggtcgacggtctccgggcaaacggc
atcccggcggcgacgatcaacagctcgctcgggtatggggagcagaagatcgtcgagcgg
gtgatcctcgaaggccgcatccggatcctctacgtctcgccggaacgggcagtgcagccg
ttcttcctctcgctcatcgcaaaagcggacgtccggctcatcgccatcgatgaggcgcac
tgcatctccatgtggggccacaacttccgccccgaataccgccggcttcgggtgctcaaa
gagcggttccccaccgtccccgtcatcgccctgaccgcgaccgccatccccgccgtccag
aacgacatcgcggtcgagctcgctctctcgaaccctgcccggttcgtcgggagtttcaac
cgcaaaaacctcacctaccgggtggtgccgaaggcacgctacttcccgaggctggtcgcc
tacctgaatgaacacaaaaacgacgccggcatcatctactgcttctcccagaaagcaacg
gtggaactcgcgaagaaactgcaggataaagggttctcggcgctcccctaccacgccggc
ctccccgacgccgtccgcgcggagcaccaggaggccttctcccgcggcgacgttgcgatc
atctgcgccaccgtcgccttcggcatgggcatcgacaaaccggacgtccggttcgtcatc
cacaccgacctcccgaaggatatcgagtcctactaccaggagaccggcagagcagggagg
gacggggagccgggcgactgcatcctctactactcccgtggcgactacggcacgatccgc
tacatcatcgagaaggagggcgccgatgcgacacagaaggacgtcgcctaccgtaaagtg
ggggcgatgctcgactactgcgagactcccggatgccggaggaagttcctgctcgcctac
ttcggcgagtcctacccggaggagcggtgcggcgcatgcgaccgctgcgagacgccggtg
aaggtattcgacgggacggaggtggcggcggcggtcatcgcgtgcatccgcgagacaggg
gaacggttcggcgcttcctacatcgccgacgtcctcgccggctcgaagagcgcgagggtt
cgcgagaacgggcacgaccggctttctgcctacggctccggcaggggctacacccgcgac
cagtggctgctcttcatccaggagatggtcgggaaggggttcgtcgcgtcgaccggcggc
cggtaccccgtcctcgtttcaaacgaccggagccgggcggtgctcgcggggaagaacccg
gtgccgctcgcagagccgcgtccggagggcgtcgtcgcgccggaaaccggggagaaggac
tacgacgaacccctcttcctccggctccgccggctccggaaagtcgttgccgacctcgat
cacgtgccgccgttcgtcgtcttccacgaccggagcctcaaggagatggcaacgtactac
ccgaccaccggcgttgccctcctcgagatctacggcgtcagcgaggcgaaactgaagcgt
tacggcaggaagttcctcgacgccatcgataagcactgcgccgaacacgggatcgggccg
gagcagcggagagggtga
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