Methanoculleus submarinus: OH143_03605
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Entry
OH143_03605 CDS
T08553
Name
(GenBank) HD domain-containing protein
KO
K03698
3'-5' exoribonuclease [EC:3.1.-.-]
Organism
msum
Methanoculleus submarinus
Brite
KEGG Orthology (KO) [BR:
msum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
msum03019
]
OH143_03605
Messenger RNA biogenesis [BR:
msum03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
OH143_03605
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HD
tRNA_anti-codon
Cas3_HD
TraI_2
HDOD
Motif
Other DBs
NCBI-ProteinID:
UYU19185
UniProt:
A0AAX3EAL8
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Position
722055..723008
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AA seq
317 aa
AA seq
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MFEKATFVEEINGGVQVDAPFVVETAELREKRGGKYIQLAISDKTGRGTCKVWGTPDHSV
EQIEAFCRAIRPGEIYRIQGYAKVFNGACEVNVNDGITCLVDPVPQDRVEPSLFVYAPVD
IESVRLGLARMAAKIEEPGISTLISMVMNDAPGFLDAPAAKFHHHAYIGGLAEHTLETAE
IALSLSGTVSRAEMDTDVLLAGALLHDIGKATCFCRRGFSFVPLPEYTLVGHTAIGAAAL
MKHSAGVDPARFGHILHIVMSHHGPHGDVQPRTPEAWAVHFADNASAFLREVSDDAADLA
PGEGRQGALSGKAVYRF
NT seq
954 nt
NT seq
+upstream
nt +downstream
nt
gtgtttgagaaggcaaccttcgtggaggagatcaacgggggcgtgcaagtcgacgcgccg
ttcgtggtggaaaccgcagaactccgcgagaagcggggcggcaagtatatccagctcgcc
atctccgataagaccggccggggaacctgcaaggtctgggggacgccggatcacagcgtg
gagcagatcgaggcgttctgccgcgcgatccggccgggcgagatctaccgcattcagggc
tacgcgaaggtcttcaacggcgcctgcgaggtcaacgtgaacgacgggatcacctgcctc
gtcgacccggtgccgcaggacagggtcgagccgtccctgttcgtttatgcgcccgtcgat
atcgaaagcgtccggttggggctcgcccgtatggccgcgaagatcgaggagcccggcata
tccaccctcatctcaatggtcatgaacgacgccccgggtttcctcgacgctcccgcagcg
aaattccaccaccatgcctacatcggcgggcttgcggagcacaccctcgagaccgcggag
attgcgctctctctttcgggcacggtctcgcgggcggagatggataccgacgtcctcctc
gccggtgcgctcctccacgatatcgggaaggcgacctgcttttgccgccgagggttctcg
ttcgtcccgctcccggaatacaccctcgtcgggcatacggcgatcggggctgcggcgctc
atgaagcattccgccggtgtcgaccctgcacggttcggccacatcctccatatcgtgatg
tcgcaccacggcccccacggggatgtccagccccggacacccgaagcctgggcggttcac
ttcgccgacaacgcaagcgccttcctccgggaagtctcggacgacgccgcggatcttgca
ccgggagaggggcggcagggggcactgagcgggaaggcggtctaccggttctga
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