KEGG   Methanoculleus submarinus: OH143_03885
Entry
OH143_03885       CDS       T08553                                 
Symbol
fen
Name
(GenBank) flap endonuclease-1
  KO
K04799  flap endonuclease-1 [EC:3.1.-.-]
Organism
msum  Methanoculleus submarinus
Pathway
msum03030  DNA replication
msum03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:msum00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    OH143_03885 (fen)
   03410 Base excision repair
    OH143_03885 (fen)
   03450 Non-homologous end-joining
    OH143_03885 (fen)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:msum03032]
    OH143_03885 (fen)
   03400 DNA repair and recombination proteins [BR:msum03400]
    OH143_03885 (fen)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:msum04147]
    OH143_03885 (fen)
DNA replication proteins [BR:msum03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    OH143_03885 (fen)
 Prokaryotic type
   Elongation factors (archaeal)
    Other elongation factors
     OH143_03885 (fen)
DNA repair and recombination proteins [BR:msum03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     OH143_03885 (fen)
Exosome [BR:msum04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   OH143_03885 (fen)
SSDB
Motif
Pfam: XPG_I XPG_N 5_3_exonuc 5_3_exonuc_N
Other DBs
NCBI-ProteinID: UYU19238
UniProt: A0AAX3EB09
LinkDB
Position
775713..776714
AA seq 333 aa
MGVAIRDILADCKETLTWDDLSGIAALDAHNALYQFLSIIRQPDGTPLMNGAGRITSHLS
GILFRTVNFLEKGIRPVFVFDGKPPEFKQETINERREHRARADEAWKTALREGDMEEAYK
QASASARIDSHTIASSRELLDLLGIPWVQAPSEGEAQAAYMARQGKVTYAVSQDYDSLLF
GSPVLVRNLTVSGRRKTRGRTITVNPERIVLSSFLDRLGVTREQLVKIGILVGTDFNPGI
RGVGGKTALKIVRNGEFESVIAEKQPDFNPAPIRDFFLNPPVTDDYTLEWRTPDVEGVVE
MLCGRYDFSEERVRSALAKVSVKATQKTLDAWF
NT seq 1002 nt   +upstreamnt  +downstreamnt
atgggcgttgctatccgagacatcctggcagactgtaaagaaacgttgacgtgggacgat
ctatccggcatcgccgcattggacgctcataacgcactttaccagttcctttccatcatc
cggcagccggacggcacaccgctgatgaacggtgcgggccggatcacctcgcacctctcc
ggcatcctctttcggacggtgaacttcctggaaaagggcatccgcccggtctttgtcttc
gacgggaagcccccggagttcaagcaggagacgatcaacgagcggcgcgaacatcgcgcc
cgggccgacgaggcctggaagacggcgctccgggaaggcgatatggaggaggcctacaag
caggcgagcgcatccgcccgtatcgacagccacaccatcgcatcgtcccgcgaactcctc
gacctgctcggcatcccctgggtgcaggcgccgagcgagggcgaagcgcaggcggcttac
atggcgcggcaggggaaggtcacctacgcggtctcccaggactacgactcgcttctcttc
gggtccccggtgctggtccggaacctcaccgtcagcgggcggcgaaagaccaggggacgg
acgatcacggtgaaccccgagaggatcgtcctctcctccttcctcgaccgtctcggcgtc
acgagagagcagctcgtcaagatcggcatcctggtgggcacggacttcaacccggggatc
cggggcgtcggcggcaagacggccttgaagatcgtgcggaacggcgagttcgagtccgtg
atcgccgagaagcagcccgacttcaaccccgcccccatacgcgacttcttcctcaacccg
ccggtcaccgacgactacaccctcgagtggaggacgccggacgtcgagggcgtcgtggag
atgctctgtggccgctacgacttctccgaagagcgcgtcaggagcgctctcgccaaggtc
tcggtgaaggcgacccagaagacgctggatgcctggttctga

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