Methanoculleus submarinus: OH143_05340
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Entry
OH143_05340 CDS
T08553
Symbol
prf1
Name
(GenBank) peptide chain release factor aRF-1
KO
K03265
peptide chain release factor subunit 1
Organism
msum
Methanoculleus submarinus
Pathway
msum03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
msum00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
OH143_05340 (prf1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
msum03019
]
OH143_05340 (prf1)
03012 Translation factors [BR:
msum03012
]
OH143_05340 (prf1)
Messenger RNA biogenesis [BR:
msum03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
OH143_05340 (prf1)
Translation factors [BR:
msum03012
]
Eukaryotic type
Release factors
OH143_05340 (prf1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
eRF1_2
eRF1_3
eRF1_1
baeRF_family10
acVLRF1
DUF915
Motif
Other DBs
NCBI-ProteinID:
UYU19517
UniProt:
A0AAX3EBA1
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All DBs
Position
1059243..1060514
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AA seq
423 aa
AA seq
DB search
MEETQEMDTPRKRYEFKKMLERLAEKEGSGTELITLYIPPDKQIYDVTAQLRDEFGQCAN
IKSKQTRTNVQSAISSILSRLKYYKRPPEHGMAVFCGTINVGGDRTDLDCEIIEPPEPLN
TYMYRCSSSFELEPLEQMLGEKEVYGLIVLDRREAYVGFLRGSRIEPVRGVTSTVPGKQR
KGGQSSVRFQRLRLIAINEFYKKIGDLASEVFLAEKDFFERFKGVLIGGPTPTKEEFEAG
GFLHHELQKRIIGLFDVSYTNESGLAELVENASDALKGLDIIKEKAVMNRFLQELVKDDG
AAAYGEESVRKNLELGAVDTLLLSDKLRRARLKLACQNGDYTEERTVSIEPGKHIKDLDL
GTCPKDGGSLYVAEEADIIDELTTLADQSSTTVRIISDDFEEGSMLYNAFGGIAAILRYR
TGY
NT seq
1272 nt
NT seq
+upstream
nt +downstream
nt
atggaagagacgcaagagatggatacgccgcgaaagcgctacgaatttaagaagatgctt
gagaggctggcggagaaggaagggagcggcaccgagctgatcaccctgtatatacctccg
gataagcagatatacgacgtgaccgcccagctccgcgacgagttcgggcagtgcgccaac
atcaagagcaagcagaccaggacgaacgtccagagtgccatatcctccatcctctcccgc
ctgaaatactataagcgcccgccggagcacggcatggcggtcttctgcggcacgatcaac
gtcggcggcgaccgcaccgacctcgactgcgagatcatcgagccgcccgagccgctcaac
acctacatgtaccgctgcagctcctcgttcgaactcgagccgctggagcagatgctcggg
gagaaagaggtctacggcctcatcgtccttgacagaagggaagcctacgtcgggtttctc
cggggcagccggatcgagcctgtccgcggagtcacctcgaccgtacccggcaagcagcgg
aaaggtggacagtcgagcgttcgtttccagcggctgcggctgatcgccatcaacgagttc
tacaagaagatcggcgacctcgcgagcgaggtcttcctcgccgagaaggacttcttcgag
cggttcaaaggcgtgctgatcggcggcccgacaccaaccaaggaggagttcgaggccggc
ggtttcctccaccacgagctgcagaagcggatcatcgggctcttcgacgtctcctacacg
aacgagtccgggcttgccgaactcgtcgagaacgcgtcggatgccctgaaaggcctcgat
atcatcaaggagaaggccgtgatgaaccggttcctccaggaactggtcaaggacgacgga
gcggccgcttacggggaagagagtgttcgaaagaacctggaactcggtgccgtcgacacc
ctcctcctctccgacaaactccggagagcccggctgaaacttgcctgccagaacggcgat
tacaccgaggagcggacggtcagcatcgaaccgggcaaacacatcaaagacctcgacctc
ggcacctgccccaaagacggcggatcgctctacgtggccgaagaggccgatatcatcgac
gaactgaccacgctcgccgaccagagcagcacgacggtcaggatcatctcggacgacttc
gaagaaggttcgatgctttacaacgcattcggcgggatcgctgcaatcctgcgctacagg
acaggatactaa
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