Methanoculleus submarinus: OH143_08275
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Entry
OH143_08275 CDS
T08553
Symbol
rpoB
Name
(GenBank) DNA-directed RNA polymerase subunit B
KO
K03044
DNA-directed RNA polymerase subunit B' [EC:
2.7.7.6
]
Organism
msum
Methanoculleus submarinus
Pathway
msum03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
msum00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
OH143_08275 (rpoB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
msum03021
]
OH143_08275 (rpoB)
Enzymes [BR:
msum01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
OH143_08275 (rpoB)
Transcription machinery [BR:
msum03021
]
Prokaryotic type
Archaeal type
RNA polymerase
Core subunits
OH143_08275 (rpoB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_7
RNA_pol_Rpb2_4
RNA_pol_Rpb2_5
Auto_anti-p27
Vps36-NZF-N
Motif
Other DBs
NCBI-ProteinID:
UYU17701
UniProt:
A0AAX3E6A8
LinkDB
All DBs
Position
1609982..1611796
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AA seq
604 aa
AA seq
DB search
MRQSRVFVDGALIGLVDDPRELVERMREMRRHGEISSEVNVSYKDFNNDVIIHTDRGRAR
RPLIVVKGGVPQVTDDDIERLRNGETIFEDVARKGAIEFVDAEEEEDLFIAINEADLTPE
HTHLEIDPSLILGIGAAHVPFPEHNASPRVTMGAGMVKQALGFAASNMKLRPDTRGHMLH
YGQKPLTFTQTSDVIGSDDRPAGQNFVVAIISYEGFNIEDALIINKASIDRGLGRSHFFR
TYDGEERRYPGGQVDRIEIPDEEVSGAHGAEFYANLDIDGVINPETVVREKDVLIGKTSP
PRFLEEPTSELIAVEKRRDTSVTMRSNEHGIVDTVIITEGENSSRLVKVRTRDLRVPEVG
DKFASRHGQKGVIGLIQPSADMPFTESGMTPDLIINPHAVPSRMTIGHMLEMLGGKVGSL
EGHRINATAFRGERETALRSSLKELGFSHNGREVMYDGITGRQFAADIYIGVIYYQKLYH
MVSSKMHARSRGPVQVLTRQPTEGRAREGGLRFGEMERDVMIGHGAAMALKERLLDESDK
VTQWVCAKCGMVAMVDRKRKVTRCLACGGETDIYPVEMSYAFKLLLDEMKSMGIAPRLRL
DDMV
NT seq
1815 nt
NT seq
+upstream
nt +downstream
nt
atgagacagtcacgtgtcttcgttgacggagcccttatcgggcttgtggacgacccgcgg
gaactggtcgagcggatgcgcgaaatgcgccggcacggcgagatctcctccgaggtcaac
gtatcctacaaggacttcaacaacgacgtcatcatccataccgatcgcggcagggcacgc
cggccgctgatcgtggtcaaaggcggtgttccgcaggtaaccgacgacgatatcgagcgt
ctccgaaacggcgagacaatcttcgaggacgtggcgcggaagggcgcgatcgagttcgtc
gacgccgaagaggaggaagacctcttcatcgccatcaacgaggcggacctcacccccgag
cacacgcatctcgagatcgatccctcgctcatcctgggtatcggtgcggcgcacgtcccg
ttccccgagcacaacgccagtccccgtgtcaccatgggtgccgggatggtcaagcaggcg
ctcggctttgcggcatcgaacatgaaactccgccccgacacccggggacacatgctccac
tacggccagaagccgctcaccttcacccagacatccgatgtgatcggctccgacgatcgg
cccgcgggccagaacttcgtcgtcgccatcatctcgtatgaagggttcaacattgaggat
gcgctgatcatcaacaaggcctccatcgaccgcggcctcgggcgttcgcacttcttccgc
acctacgacggcgaagagcggcgataccccggcggccaggtcgaccggatcgagatcccg
gacgaagaggtctccggcgcgcacggtgccgagttctacgcgaacctggacatcgacggc
gtcatcaaccccgagacggtcgtccgcgagaaagacgtgctgatcggcaagacctccccg
ccccggttcctcgaagagcctacgagcgagttgatcgccgtcgaaaaacggcgcgacacc
tcggtcacgatgcggagcaacgagcacggtatcgtggacaccgtcatcatcaccgagggc
gagaactcctcgcgcctggtgaaggtcaggacccgtgacctccgggtgccggaggtcggc
gacaagttcgcttcccggcacggtcagaagggcgtcatcgggctgatccagccttcggcg
gatatgccgttcaccgagtcgggcatgacgcccgacctgatcatcaacccccacgccgtc
ccgagccgtatgaccatcgggcacatgctcgagatgctgggcggcaaggtcggctcgctc
gaagggcaccggatcaacgcgaccgcgttccgcggcgaacgcgagacggctctgcggagt
tcactcaaagaactcggtttttcgcacaacggccgcgaagtcatgtacgacggtatcacc
ggccggcagtttgcggccgacatctacatcggcgtcatctactaccagaaactctaccac
atggtatcgagtaagatgcacgcgcggtcgcgcggccccgtgcaggtgctcacccgccag
ccgaccgaaggacgtgcccgcgagggtggtctccggttcggtgagatggagcgggacgtg
atgatcggccacggcgcggccatggccttaaaagaacgtctcctcgatgagtcggacaag
gtgacccagtgggtctgcgcgaagtgcggtatggtggcgatggtcgaccggaagaggaag
gtgacgcggtgccttgcctgcggcggtgagaccgatatctaccctgtcgagatgagctac
gcattcaagctcctcctcgacgagatgaagagcatgggcatcgctccccgcctgagactc
gacgatatggtgtaa
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