Methanoculleus submarinus: OH143_08320
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Entry
OH143_08320 CDS
T08553
Symbol
thpR
Name
(GenBank) RNA 2',3'-cyclic phosphodiesterase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
msum
Methanoculleus submarinus
Brite
KEGG Orthology (KO) [BR:
msum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
msum03016
]
OH143_08320 (thpR)
Enzymes [BR:
msum01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
OH143_08320 (thpR)
Transfer RNA biogenesis [BR:
msum03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
OH143_08320 (thpR)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LigT_PEase
2_5_RNA_ligase2
AKAP7_NLS
Motif
Other DBs
NCBI-ProteinID:
UYU17709
UniProt:
A0AAX3E661
LinkDB
All DBs
Position
1622024..1622563
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AA seq
179 aa
AA seq
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MVRTFVAIDLPEEIRERARESQEILRRSSGRLAIVDPANLHLTVKFLGEVDPAQVDPVVE
ALRAVHADPFSLTVGYAVCNPPRKPRVIWCDVTDGGESAVLARQVDALLAPLGFPRETRP
FRPHVTLARVKEFHPSQCREAASTPREPLGTCRVTGIKLKKSTLTPRGSIYEDLAEVVF
NT seq
540 nt
NT seq
+upstream
nt +downstream
nt
atggtcaggacgttcgttgcaatcgatctgccggaggagatccgggagcgcgcccgtgag
tcccaggagatcctgagacggtcgtccgggcggctcgcgatcgtcgaccctgcaaacctc
catcttacggtgaaattcctcggggaggtcgatccggcgcaggtcgatccggttgtcgag
gcgctccgggccgtccacgccgaccccttcagcctgacggtcgggtacgcggtctgcaat
ccgccgcggaagccgcgggtgatctggtgcgatgtcacggacggcggggagagcgccgtc
ctcgcccggcaggtggatgcactccttgcgccgctcgggttcccccgggagacgcgtcct
ttccgccctcacgtgacccttgcccgggtaaaagagttccacccctcgcagtgccgggag
gcggcatccaccccgcgcgaaccgctcgggacctgccgggtgacaggcatcaaactcaag
aagagcacgctgacgccccgcggttcgatctacgaagaccttgcggaggtcgtgttttga
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