Methanoculleus submarinus: OH143_09410
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Entry
OH143_09410 CDS
T08553
Name
(GenBank) RNA-guided pseudouridylation complex pseudouridine synthase subunit Cbf5
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
msum
Methanoculleus submarinus
Brite
KEGG Orthology (KO) [BR:
msum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
msum03016
]
OH143_09410
Enzymes [BR:
msum01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
OH143_09410
Transfer RNA biogenesis [BR:
msum03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
OH143_09410
Prokaryotic type
OH143_09410
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
PUA
Pus10_C
DKCLD
Motif
Other DBs
NCBI-ProteinID:
UYU17913
UniProt:
A0AAX3E6Q9
LinkDB
All DBs
Position
complement(1839284..1840213)
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AA seq
309 aa
AA seq
DB search
MRKAGEGMTGQERFVPESGIVVVDKPRGPSSHQVAAWVGGILGRRVGHAGTLDPQVSGVL
IVMFGGAVRLAPVLLSHNKEYVCLMRLHGDASRESVEQAAKEFTGRIYQRPPRKSAVKRS
LRIRKIQEIEILDMDGRLVLFRVRCDAGTYIRTLCVHLGYALGTCAHMEELRRIRSGSFD
ETTIVTLHELADAVAAAREGNHEPLQGMILPPAAAVADLAKVVVRDTAVDAVCHGAVLAG
VGVVGKEGGFAKGETVAIVTERGELVGLGKGLVNSSALKPGEPGFVVAPTTVLMRPGTYP
RGWKARTGS
NT seq
930 nt
NT seq
+upstream
nt +downstream
nt
atgcggaaggcaggtgaggggatgaccggccaggaacgtttcgtcccggaatccgggatc
gtcgtcgtcgacaagccccgggggccgagcagccaccaggtggccgcctgggttgggggt
atcctcgggcgccgggtgggccacgccgggacgctcgatccacaggtctccggggtgctc
atcgtcatgttcggcggcgccgtccggctcgctcccgtcctcctctcgcacaacaaggag
tatgtctgcctgatgcgccttcacggcgacgcctcccgggagtccgtggagcaggcggcg
aaggagttcaccggccggatctaccagcggccgccgagaaaaagcgcggtaaagcggagc
ctccggatcaggaagatccaggagatcgagatcctggacatggacggccggctcgtcctc
ttccgggtcaggtgcgatgccgggacatacatccggacgctctgcgttcatctgggctac
gcgctcgggacctgcgcacacatggaggaactccggaggatacgatcgggatccttcgac
gagaccaccatcgtcacgctccacgaactcgccgatgccgttgcagccgcccgggagggc
aatcatgaacccctgcagggaatgatcctccccccggcggccgccgtcgccgatcttgcg
aaggtcgtcgtccgcgacaccgccgtcgacgccgtctgccacggtgcggtgctcgccggg
gtgggggtcgtcgggaaagagggcgggtttgcaaaaggcgagacggtcgcgatcgtgacc
gagcgcggcgaactcgtggggcttgggaagggcctcgtcaattcgtcggcgctgaaaccc
ggggaaccggggttcgtcgtcgcgcccaccaccgtcctgatgcggcccggcacctacccc
cgcggctggaaggcacgcacagggagctaa
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