Methanoculleus submarinus: OH143_09925
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Entry
OH143_09925 CDS
T08553
Symbol
endA
Name
(GenBank) tRNA-intron lyase
KO
K01170
tRNA-intron endonuclease, archaea type [EC:
4.6.1.16
]
Organism
msum
Methanoculleus submarinus
Brite
KEGG Orthology (KO) [BR:
msum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
msum03016
]
OH143_09925 (endA)
Enzymes [BR:
msum01000
]
4. Lyases
4.6 Phosphorus-oxygen lyases
4.6.1 Phosphorus-oxygen lyases (only sub-subclass identified to date)
4.6.1.16 tRNA-intron lyase
OH143_09925 (endA)
Transfer RNA biogenesis [BR:
msum03016
]
Prokaryotic type
tRNA spricing factors
tRNA splicing endonucleases
OH143_09925 (endA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_int_endo
tRNA_int_endo_N
tRNA_int_end_N2
Motif
Other DBs
NCBI-ProteinID:
UYU18012
UniProt:
A0AAX3E795
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All DBs
Position
1932417..1933427
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AA seq
336 aa
AA seq
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MLAIFDGTWVRLGGEGRALYEQGGYGRPEGRGLRLSPEEALYLMERNKIDVKDFGFDALL
GLFAGQPNFIRRYLVYRDIRERGYVIQPGPQDFRVFRRGHKPGAGKSRYLIRVLSERDIV
DFDRLSQDVVAAVNMRKQYLLAVVDDEDELTYYEVRVQDLPGVGEPAGCTTPVEATLFGT
YALAHLPPGTPLEEDWYGKRLDTERLLLRPVESIYLMRRGCLSITQDEEPMAAEQFLDAA
AEKDVEIREKERVFSDLREKGYIPRTGYKFGHHFRVYSGKKSHSEMLVHAVPSGTSTPMS
AVSRSVRLAHSVKKKMLFACIYNTDIRYVEFARIKL
NT seq
1011 nt
NT seq
+upstream
nt +downstream
nt
gtgttggcgatattcgacggaacctgggtacgcctcggcggtgaagggcgggcgctctac
gagcagggcggctacggcaggcccgagggacgcggcctccgcctctctcccgaagaggcg
ctctacctcatggaacgaaacaagatcgacgtgaaagacttcggttttgacgccctgctc
ggcctctttgccggccagccgaacttcatccgcaggtacctcgtctaccgcgacatccgc
gagcgaggatacgtgatccagcccggcccgcaggatttccgcgtcttccgccgcggccac
aagcccggcgccgggaagtcccggtacctgatccgggtcctctccgagcgcgacatcgtc
gacttcgaccggttaagccaggacgtggtcgctgcggtcaacatgcgcaagcagtacctc
ctcgcggtcgtcgacgacgaggacgaactgacctactacgaggtgcgggtacaggacctt
cccggagtcggggagcctgcggggtgcacaacaccggtggaggccacgctcttcgggaca
tacgcgctcgcccacctgccgccgggaaccccgctcgaggaggactggtacggcaagaga
ctcgataccgaacggctgctcctccgcccggtcgagtcgatctacctcatgcgcagaggc
tgtctctcgatcacgcaggatgaggaaccgatggccgcagagcagttcctcgatgcggcg
gcagaaaaggacgtcgagatacgggagaaggagcgggtcttctcagacctccgggagaag
ggctacatcccgagaaccgggtacaagttcggccaccacttccgcgtctactccgggaag
aagagccattccgagatgctcgtccatgccgttccgtccgggacgtccacgccgatgagc
gccgtctcccgctcggtcaggcttgctcacagcgtcaaaaagaagatgttgtttgcctgc
atatataacaccgatatcagatacgtcgaattcgcccgaataaaactgtga
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