Methanoculleus submarinus: OH143_11410
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Entry
OH143_11410 CDS
T08553
Name
(GenBank) mRNA surveillance protein pelota
KO
K06965
protein pelota
Organism
msum
Methanoculleus submarinus
Pathway
msum03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
msum00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
OH143_11410
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
msum03019
]
OH143_11410
Messenger RNA biogenesis [BR:
msum03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
OH143_11410
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Gene cluster
GFIT
Motif
Pfam:
eRF1_1
eRF1_3
eRF1_2
bHLH_INO2
Ribosomal_L7Ae
Motif
Other DBs
NCBI-ProteinID:
UYU18299
UniProt:
A0AAX3E8V6
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Position
2235864..2236889
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AA seq
341 aa
AA seq
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MKAEVREMKRQFGEIRLFPETLDDLWHLSHLVGPGDLVFATTFRSVEAATDKLRPEKVEK
RPVRLGIWVEKVEFHQHTNRLRIAGIIESGVDVAAHHTLNVEAGFEISVVKRWRPVDCER
IRRAVDASAYGVVHVVSVEEGEAQIYRLRQFGPEWVTTVTAGSSKGADTGTRSALFEKTL
DTVAAVTGPLVVAGPGFVKDEFAEYVKVRAPDLAGRMVAVETRRIGRGAVQEVIGQGILD
RLLGDLHLAREVALMDEVLVRIATEGAVAYGIDEVRKAVAYGAAETVLVADTLLRDDEAT
GVIEQAERVNATVVVLSTEFEPGERLDAIGGAAALLRYKIE
NT seq
1026 nt
NT seq
+upstream
nt +downstream
nt
atgaaggccgaagtccgggagatgaagagacagttcggcgagatacgtctcttcccggag
acgctcgacgacctctggcacctctcccacctggttgggcccggggatctcgtctttgcg
acgacctttcggagcgtggaggcggcgaccgacaaactccggccggagaaggtcgagaaa
cggccggtgcggcttgggatttgggttgagaaggtggagttccaccagcacacgaaccgt
ctccggatcgccggcatcatcgagagcggggtggacgttgccgcacaccacaccctgaac
gtcgaagccgggttcgagatctcggttgtcaaacgctggcggcccgtcgactgtgagcgg
atccggcgcgcggtcgacgcctccgcgtacggcgtggttcacgtcgtgagcgtcgaggaa
ggagaggcgcagatctaccggctgcgccagttcggcccggagtgggtgacgaccgtcacg
gccgggagcagcaagggtgccgataccggcacccggtcggcgctttttgagaaaacgctt
gacacggtcgccgcggtcaccgggcctctcgtcgtcgcgggcccggggttcgtgaaggac
gagtttgcggagtacgtgaaggtccgggcccccgacctcgccgggcggatggtcgccgtc
gagacccgtcgcatcgggcggggcgccgtgcaggaggtcatcggacaggggattcttgac
cggctgctcggcgacctccacctcgcacgggaggtcgcgctgatggacgaggtcctggtc
aggatcgcgaccgagggcgccgtcgcctacggtatcgacgaggtccgcaaagcggttgcc
tacggtgcggcggagacggtgctggtcgccgacaccctgctccgcgacgatgaggctacg
ggcgtcatcgagcaggccgagcgcgtcaacgcaacggtcgtggtgctgagcactgagttc
gagcccggggagcgccttgatgccatcgggggcgccgcggcgcttttgcggtataagatc
gagtga
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