Mesobacillus subterraneus: LC048_03380
Help
Entry
LC048_03380 CDS
T09285
Symbol
thpR
Name
(GenBank) RNA 2',3'-cyclic phosphodiesterase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
msut
Mesobacillus subterraneus
Brite
KEGG Orthology (KO) [BR:
msut00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
msut03016
]
LC048_03380 (thpR)
Enzymes [BR:
msut01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
LC048_03380 (thpR)
Transfer RNA biogenesis [BR:
msut03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
LC048_03380 (thpR)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LigT_PEase
2_5_RNA_ligase2
AKAP7_NLS
Acb1
HVSL
2H-SAK
Motif
Other DBs
NCBI-ProteinID:
WLR56021
LinkDB
All DBs
Position
673970..674545
Genome browser
AA seq
191 aa
AA seq
DB search
MTGQQTHYFYALELPGEIKEIMKGTIHSLQGELPFKTWVHPQDLHITLAFLGNAPEEKIK
AANERIEAAINKTTTFKLEINHLGIFGRKDAPRIFWAGLEKSTELNEVREAVFSSCTSAG
FTLETRPFSPHITLSRKWAGEEAFTTDQLEVLNPIKKEFTFHAERVVLYKTHLGKSPKYE
PIILFPLASRS
NT seq
576 nt
NT seq
+upstream
nt +downstream
nt
ttgacaggtcagcaaacacattatttctatgctctcgaacttcctggggagataaaagaa
atcatgaagggcacaatccacagcctgcaaggggaattgccttttaaaacctgggtacat
ccacaggatttacatattacgctcgctttccttgggaacgctcctgaagagaaaataaag
gctgccaatgaacggatagaagcagcaataaataaaacaacaacatttaaactggagatc
aatcatctaggcatttttggcagaaaggacgctccaagaattttttgggcagggctagaa
aaatccacggagttgaatgaagtaagagaagcggtattttcatcttgcacgtccgctggc
tttacccttgagacacgcccgttcagcccgcatatcactctttccaggaaatgggccgga
gaggaagctttcaccactgaccagcttgaagtattaaacccaattaaaaaagaatttact
tttcatgccgaaagagtcgttttgtacaagactcatttggggaaaagtccaaaatatgaa
ccaataatactattcccgcttgcttcccgttcttga
DBGET
integrated database retrieval system
