Mesobacillus subterraneus: LC048_04610
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Entry
LC048_04610 CDS
T09285
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
msut
Mesobacillus subterraneus
Pathway
msut03410
Base excision repair
msut03430
Mismatch repair
msut03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
msut00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
LC048_04610 (recJ)
03430 Mismatch repair
LC048_04610 (recJ)
03440 Homologous recombination
LC048_04610 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
msut03400
]
LC048_04610 (recJ)
DNA repair and recombination proteins [BR:
msut03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
LC048_04610 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
LC048_04610 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
LC048_04610 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ssDNA-exonuc_C
RecJ_OB
DHH
DHHA1
DUF4254
Motif
Other DBs
NCBI-ProteinID:
WLR56225
LinkDB
All DBs
Position
935998..938364
Genome browser
AA seq
788 aa
AA seq
DB search
MLKPKSRWIVKKSDQTIIESLAEEMNINHLTASLLVNRGLDTVEDARYFLFGQKSEFHDP
FLLKDMDKAVERINKAIETQEPILVFGDYDADGVSSTTVLMKALAELGANADYYIPNRFT
EGYGPNEKAFRSAADSGVGLIITVDTGISALHEATVAKDLGVDLIITDHHEPGPVLPDAF
AIIHPKLDDSVYPFKDLAGVGVAFKVAHALLGRVPEHLLEFAAIGTIADLVPLMGENRLI
AQRGIEKLKATQSPGLNALLKLAKTDRAGIDEETIGFMIGPRVNAAGRLGSADPAVQLMM
TLDPEEAMMLAEEIDSINKERQNIVSQIAEEAVAEVERNYPIEDNSVLVVGKEGWNAGVI
GIVASKLVEKYYRPTIVLSFDKEKGLAKGSARSIAGFDLFKNLSTCRDILPHFGGHPMAA
GMTLSLDDVDALRSRLNALAIEQLKEEDLIPVSHIDARIDVKEITIETINELGMLSPYGV
SNPKPKVLIDGANISTLRKIGADQSHLKLALEEEGTVIDGIGFGFGYLHDHISPSSQLSV
IGELSINEWNNIKKPQIFLRDVAVKNWQLFDFRGLKRLEKLPAMIPGSNIKWILFNSDLK
NKFSPIIGDSLELVSTEEQAEQIGFDQSYVVLLDLPPSKDILEKLFAGKKPGRIYVHFYK
ENSDFFTTMPTREHFKWFYAFLAKKGPFDLKRYGGDLAKHKGWTKETVEFMSQVFFELEF
VKINNGFISLEENLPKRDLSESKTYQHKVQAFTLENELLYSSYEQLKNWFDHFVQESVKN
EEAIIQWI
NT seq
2367 nt
NT seq
+upstream
nt +downstream
nt
atgttaaagccaaaatcaaggtggattgttaaaaaatctgaccagacaataatagagtca
ctcgccgaggaaatgaacataaatcatctgactgcttcattgctagtcaatcgcggactg
gataccgtggaagatgcccggtattttttatttgggcaaaaaagcgaatttcacgaccca
tttttgctgaaagatatggataaggctgttgagcggatcaataaggcaatagaaacgcaa
gagcctattttggtatttggtgattatgatgcagatggtgtaagcagtacaacagtcctg
atgaaggctctggctgaactaggagcgaacgctgactattacataccgaaccgttttaca
gaagggtacggtccaaatgagaaagcattccgaagtgccgcagacagcggagtaggcttg
atcattactgtcgatacgggcatatcagctcttcatgaagcaactgttgccaaggactta
ggtgtcgacctgatcataacggatcaccatgaaccgggtccggtcctgcctgatgcgttt
gcgatcattcatccaaagctggacgacagtgtataccctttcaaggatttagctggtgta
ggtgtcgcttttaaggttgcacatgctttgcttggaagagtcccggagcatttgttggag
tttgccgctatagggacaattgccgacctcgtacccctgatgggagagaacaggctgatt
gctcagaggggaatagagaaattgaaggcgacccagtcacctggtttgaatgcgcttctt
aagctggctaaaacagacagggcaggcattgatgaagaaaccatcggttttatgattggc
ccgagggttaatgcagccggccggcttggcagcgctgatcctgcggttcaattgatgatg
actcttgatcctgaagaggcgatgatgctagcagaagaaatcgattcaataaataaagaa
cggcagaatattgtttcacaaattgctgaagaagcagttgctgaagtagaaaggaattat
ccaatagaagataattcagtccttgtcgtcggcaaggaaggctggaacgcaggagtcatt
ggcatcgtagcctccaagctcgttgagaaatattaccgaccaacgattgttctcagtttt
gataaagagaaggggctcgcgaaaggatctgcacgcagtatcgccggtttcgatcttttt
aaaaatctttcaacctgcagagacatccttcctcattttggcggacatccaatggccgcg
ggcatgacattgagtcttgatgatgtcgacgcattaaggtcaaggttgaatgcactggca
atagagcagctgaaagaagaagatttaattccggtatcccatatcgatgccaggattgat
gtgaaagagattacgattgaaacgataaatgaacttggaatgctttctccatatggtgta
agcaaccctaaaccgaaagtgctgattgatggggccaatatttccaccctgagaaagata
ggggcagatcagtcacatcttaagctggcacttgaagaggaaggtactgtgattgatgga
ataggtttcggctttggatatctccatgaccatatctcgccgagttcgcagctgtcggtc
attggcgaactgtcgatcaacgaatggaacaatatcaagaaaccgcagatttttcttagg
gacgtagccgtcaagaactggcagctattcgattttcgtgggcttaaaaggttggaaaag
cttccagccatgattccaggcagtaatattaagtggattctattcaactccgatttgaaa
aataagttttctcctataatcggagactcattggaactggtatcaactgaagagcaggct
gaacaaatcgggttcgaccaatcttatgtcgtcctgttggacctgccgccttccaaagat
atactggagaaattatttgccgggaagaagccgggaaggatttatgtccatttttacaaa
gaaaacagcgatttcttcacgactatgccaaccagggagcatttcaaatggttttatgct
ttcctcgcaaagaaagggccatttgacctaaaacgttatggcggcgatttggccaagcat
aaagggtggacaaaagaaacagtagaattcatgtcgcaggtgttttttgaactagagttt
gttaaaataaacaatgggtttatttcactagaagaaaatctccctaaaagggatctttct
gaatccaaaacatatcagcacaaggtgcaagcatttactcttgaaaatgaattgctctac
tcatcgtatgagcaattgaagaattggtttgaccatttcgttcaagagtcggtgaaaaat
gaggaggcaattattcaatggatttga
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