Mesobacillus subterraneus: LC048_04945
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Entry
LC048_04945 CDS
T09285
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
msut
Mesobacillus subterraneus
Pathway
msut03030
DNA replication
msut03430
Mismatch repair
msut03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
msut00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LC048_04945 (holA)
03430 Mismatch repair
LC048_04945 (holA)
03440 Homologous recombination
LC048_04945 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
msut03032
]
LC048_04945 (holA)
03400 DNA repair and recombination proteins [BR:
msut03400
]
LC048_04945 (holA)
Enzymes [BR:
msut01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
LC048_04945 (holA)
DNA replication proteins [BR:
msut03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
LC048_04945 (holA)
DNA repair and recombination proteins [BR:
msut03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
LC048_04945 (holA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta_C
DNA_pol3_delta
DUF1848
DUF1598
Motif
Other DBs
NCBI-ProteinID:
WLR56278
LinkDB
All DBs
Position
1000848..1001870
Genome browser
AA seq
340 aa
AA seq
DB search
MVLDIWKKISKKQVDPVYLMYGTEAFLINETKQLLVDNVLDDEEKDFNYSVYDLEETPIE
AALEDAETFPFMGEKRLVILQNPVFLTSEKSKAKVEHNLAKLEEYLSQPAPYSIVVFSAP
YEKLDERKKVTKELKRKATVIEAKKLSEPETKAWVKERAQANGAVIDQDAIELLLTLAGT
NLFMLTSEIDKLALYAGENEPISREIVDRLTARSLEQNIFSLVDKVVHRNVESALRIYYD
LLKQNEEPIKILAVITGQFRLIYQVKELAREGYGQQQIAGTLKVHPFRVKLAAGQAGAFS
DEELTRIMKLLADADYQMKTGGMKKEMLIEMILFQINGRK
NT seq
1023 nt
NT seq
+upstream
nt +downstream
nt
gtggtattggacatttggaaaaaaataagcaaaaaacaggtggatcctgtctatttaatg
tatggaaccgaagcttttttaataaatgagacaaaacagcttcttgtggacaatgttttg
gacgatgaagagaaagatttcaattattcggtatacgatttagaagaaacaccaattgag
gcagctctggaagatgctgaaacttttccattcatgggagagaaacgattggtcattctc
caaaatcctgtatttttgacatcggaaaagtcaaaagctaaggtagagcataacttagcg
aaactggaggaatatctttcacagcctgcaccatactcgatcgttgttttttctgctcca
tacgagaaactggacgaaagaaagaaagtgactaaggagttaaagcgaaaagctacggtc
atcgaagccaagaagctgagtgaaccggaaactaaagcctgggtaaaagaacgcgctcaa
gccaatggagctgtgatagatcaagatgcaattgagcttctcttgacgcttgcagggacg
aatttgttcatgttgacgtctgaaatagataaactggcactttatgcgggagaaaacgag
ccaatcagcagggaaattgtcgaccgactgactgcaagatcgttggaacagaatattttc
tctctggtcgacaaggttgtccaccgtaatgttgagtcagccttaaggatttattatgat
ttattaaaacaaaatgaagaaccgattaaaattcttgctgtgataacggggcaattcagg
ctgatttaccaggtgaaggagcttgcccgcgaaggctatggccagcagcagattgccggt
actttgaaagtccatccattcagggtaaaattggcagcagggcaggcaggagcattttct
gatgaggaattgacgaggatcatgaaacttctagctgatgctgattatcaaatgaaaact
ggcggcatgaaaaaagaaatgttgattgaaatgatattattccagattaatggcaggaaa
tga
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