Mesobacillus subterraneus: LC048_05175
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Entry
LC048_05175 CDS
T09285
Name
(GenBank) DEAD/DEAH box helicase
KO
K18692
ATP-dependent RNA helicase CshB [EC:
5.6.2.7
]
Organism
msut
Mesobacillus subterraneus
Brite
KEGG Orthology (KO) [BR:
msut00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
msut03019
]
LC048_05175
03009 Ribosome biogenesis [BR:
msut03009
]
LC048_05175
Enzymes [BR:
msut01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
LC048_05175
Messenger RNA biogenesis [BR:
msut03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
LC048_05175
Ribosome biogenesis [BR:
msut03009
]
Prokaryotic type
rRNA helicases
LC048_05175
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Helicase_RecD
AAA_22
Motif
Other DBs
NCBI-ProteinID:
WLR56314
LinkDB
All DBs
Position
1050376..1051692
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AA seq
438 aa
AA seq
DB search
MSETKFNRYELKPFIIDAINKLGFHEPTEIQERLIPTIMKGESAIGQSQTGTGKTHAYVL
PIMDKLNPSRNEVQAVITAPTRELANQIYHEVLKIAEHAPQGEQITARCYIGGTDKQRTI
EKLKTQPQIVIGTPGRINDLVKENALFVHTANMLVIDEADLMLDMGFIEDIDQFASRMPE
KLQMLVFSATIPEKLKPFLKKYMENPKYVQIDPKQATAEKIEHILLPARHRDKIGLVYSA
LVAFNPYLGIVFANTKKKVDEIADGLIQKGMKVGRIHGDLSPRERKRVMKQIKDLEFQYL
VATDLAARGIDIQGISHVINYELPTDLDFYIHRVGRTARAGSSGVALTVYEQSDEDALIR
LEKMGITFRNIDLKKGELTEIEERNRRLNRKKKETTGEAKAKNLVSKPKKVKPGYKKKMK
YEMDKIKKRENRIQKRNK
NT seq
1317 nt
NT seq
+upstream
nt +downstream
nt
atgagtgaaacaaaatttaatcgttatgaattgaaaccattcattatagatgcgatcaat
aaactaggttttcatgagccaactgaaatccaggaacgtcttatccctacgatcatgaag
ggagaaagtgccatcggccaatcccagacgggtacaggaaagacgcatgcctatgtactg
cctatcatggacaagcttaacccatcacgcaatgaggtgcaggcggtaatcactgcgcca
actcgtgagcttgccaaccaaatttaccatgaagttcttaaaattgctgaacacgctccg
cagggagagcagatcacagctcgttgctatattggcgggacagacaagcaaagaacgatt
gaaaagctcaagacacagccgcaaatcgtcattggcactccggggaggattaacgacctg
gtaaaggaaaacgcgctatttgtgcatacggcgaacatgctcgtgatcgatgaggcagac
ttaatgcttgatatgggattcatcgaggacattgaccagttcgcatcccgtatgccagaa
aagcttcaaatgcttgtattttcagcaacgattcctgaaaaattaaaaccattccttaaa
aagtacatggaaaacccaaaatatgtacaaatcgatcctaaacaggctacagcagagaag
attgaacatattcttctgcctgcaaggcatcgtgataaaattgggcttgtttattcagcg
ctggttgcgttcaatccgtatcttggtattgtatttgctaatacaaagaaaaaagtagat
gaaattgctgatggtttgatccaaaaagggatgaaggttggccgtatccatggagacctg
agcccgcgcgaacgcaagcgtgtcatgaaacagattaaggaccttgagttccagtatctt
gttgctactgacctggccgccagaggaatcgatattcaagggatcagccatgtcatcaac
tatgaacttcctacagacctggatttttatattcacagggttggaaggactgcccgtgca
ggttcttcaggtgttgccctgacggtctatgagcagagtgatgaagatgcactgatccgt
cttgaaaaaatgggcatcacttttagaaacattgatttgaaaaaaggtgaacttaccgaa
atcgaggagcggaacagacgcctgaacagaaagaaaaaagaaactacaggcgaggcgaag
gcaaagaatcttgtttccaaacctaaaaaggtaaaaccaggctataagaagaaaatgaaa
tatgagatggataaaattaaaaagcgagaaaaccgtatacaaaaaagaaataaataa
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