Mesobacillus subterraneus: LC048_08640
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Entry
LC048_08640 CDS
T09285
Name
(GenBank) helicase C-terminal domain-containing protein
KO
K10844
DNA excision repair protein ERCC-2 [EC:
5.6.2.3
]
Organism
msut
Mesobacillus subterraneus
Pathway
msut03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
msut00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
LC048_08640
09124 Replication and repair
03420 Nucleotide excision repair
LC048_08640
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
msut03021
]
LC048_08640
03036 Chromosome and associated proteins [BR:
msut03036
]
LC048_08640
03400 DNA repair and recombination proteins [BR:
msut03400
]
LC048_08640
Enzymes [BR:
msut01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
LC048_08640
Transcription machinery [BR:
msut03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
LC048_08640
Chromosome and associated proteins [BR:
msut03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
LC048_08640
DNA repair and recombination proteins [BR:
msut03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
LC048_08640
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C_2
DEAD_2
DEAD
ResIII
zf-C3H1
Helicase_C
PhoH
Motif
Other DBs
NCBI-ProteinID:
WLR56918
LinkDB
All DBs
Position
1680167..1682452
Genome browser
AA seq
761 aa
AA seq
DB search
MENQVRIPVRTLAEYVYKSGSIVSGFRTTSSFTEGSRIHREVQKTYSEHDQSEVFLKTEI
KYEGLIFNIEGRCDGLLVNGDSTTIDEIKSTSLNLDLIDEETNLAHWAQAECYGYMYMKD
QNLDIINIQLTYVQKTSGDIKRFIRTRTYGELKKVMMNMVSAFAPYARLRLENELKRDQS
IKELKFPFDQYRIGQRQLAGSVYKTIQEGKTIFANAPTGIGKTISTIFPSVKAIGEGHLR
KLFYLTAKTTTRQTAEEAFSQLFANGLHMKVVSITAKDKVCFTEQGICNNEHCEFADGYY
DRINEAVLDILHNENTLDRLCIEKYAYKHSVCPFEFSLDLAYAADTVICDYNYIFDPKVS
LKRLIDDHKKETVLLVDEAHNLVDRGREMFSSTLEKAPFLQLKREYRGRSKGIYEITKQV
NDYFINIRKQAEPSKTVEFKEPLGEFNQLVLEFIDHAEKELLRESPGNSDVLLEAYFAAQ
NWQRISKLFDERFILYAEVGRNEVKLKQFCLDPSYLIKYAGKNFKSRIYFSATLSPIGYY
MDMLGGEKEDYVLGIPSPFSSKQSQIKIQSLSTRFKDRDDSIKPIVKTLSETIEEKPGNY
LIFFPSYLYLNSVLEEWNHGNPGIPTIVQGAGMTDVQREEFLESFKPGRSGSLVGFAVLG
GVFSEGVDLKGDRLNGVIVVGVGLPQIGFERDLIKQHFSLTGKNGYDYAYVYPGMNKVLQ
AGGRLIRSEKDTGTIVLIDDRYLQHKYQNLLPDIWKGYTIF
NT seq
2286 nt
NT seq
+upstream
nt +downstream
nt
atggagaatcaagtcaggataccagtaagaactttagctgagtatgtttataaaagtggg
agtattgtatctgggttcaggacaacctcttcttttaccgaaggctcacggattcatcgt
gaagtccagaaaacatatagtgaacacgatcaaagtgaagtgtttttaaaaactgaaata
aagtatgaaggccttatttttaacattgagggccgatgtgacgggcttcttgtaaatggg
gacagtactaccatagatgaaatcaagtcaacctctttgaaccttgaccttatcgatgag
gagacgaatcttgcccactgggcccaggccgagtgttatggatatatgtacatgaaggac
caaaacctagacattatcaatattcaactaacttatgtgcagaaaacttctggtgatata
aaaaggtttattagaactaggacttatggtgagttaaagaaagtcatgatgaacatggtc
tctgcatttgcgccttatgctaggttgcgactagagaatgagttgaagagggaccaaagc
attaaagagttaaaatttccttttgatcaataccgtattggtcagagacagcttgctggt
tcggtatacaaaaccatccaggagggtaagacgatttttgctaacgctcctacaggcatc
gggaaaaccatttcaacgatttttccttctgtcaaagcaatcggtgagggacacttgcga
aagcttttttacctgactgccaaaacaactacgaggcaaacagcagaggaggcgttcagt
caactattcgccaatggccttcacatgaaggttgtaagtataacagcaaaggacaaagtc
tgctttactgaacaagggatttgcaacaatgagcattgtgagtttgcggacggctattat
gacagaataaacgaagcagtactcgatatattgcataatgaaaacactttagacaggctt
tgtattgaaaaatacgcctacaagcatagcgtctgcccattcgaattttcactggacctt
gcatacgcggctgacacagttatttgtgattataattatatatttgacccaaaagtttcg
ttaaagcgtttgattgatgaccataaaaaggaaactgtccttcttgttgacgaggctcac
aacctggttgacagaggcagggagatgttttcatccaccttggaaaaagcaccattcttg
cagcttaaaagggagtatagagggagaagtaaaggaatttatgagattacaaagcaggta
aatgactactttatcaatataaggaaacaagctgaaccgtctaaaacggttgagtttaag
gaaccactgggagagtttaatcagttggtgttggaatttattgaccatgctgaaaaagaa
ttgctcagagagagtccggggaattcggatgtattgcttgaagcctatttcgcggcgcag
aactggcaaagaattagcaagctatttgatgaaaggttcattttatatgcagaggttggg
aggaatgaggttaaattaaagcaattttgccttgacccctcctatctaattaaatacgca
ggtaagaatttcaaatcccgtatctacttttcggcgacgttgagtccaatcggttattat
atggatatgttgggcggggaaaaggaggattatgttcttggtattccttctcctttttcg
agtaaacaatcgcaaataaaaattcaatctttatccacaagatttaaagatagagatgac
tccattaagccaatagtaaaaacattgtctgaaaccattgaggagaagccaggcaactac
ttaatattctttccgtcctatttgtatcttaattcagtgttagaagaatggaaccatggc
aatcccggtataccaacaatcgttcagggtgcaggaatgacagatgtccaacgtgaagaa
tttctggaatccttcaaaccaggtagatcgggttcccttgtgggttttgctgtcctagga
ggtgttttttcagaaggagtggatttaaagggtgatcgcctgaatggggtaattgtcgtg
ggtgtgggtctgccacagatagggtttgaacgtgatttaatcaagcagcatttttccctt
acaggtaaaaatggctatgattacgcctatgtttatccaggtatgaacaaagtgctccag
gctggtggcagactcatacggtcagaaaaggatactggcacgattgttttgattgatgac
cggtatttacagcataaatatcaaaatctgttgcccgatatatggaagggctatacgatt
ttttaa
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