Mesobacillus subterraneus: LC048_09960
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Entry
LC048_09960 CDS
T09285
Name
(GenBank) AAA family ATPase
KO
K03546
DNA repair protein SbcC/Rad50
Organism
msut
Mesobacillus subterraneus
Brite
KEGG Orthology (KO) [BR:
msut00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
msut03400
]
LC048_09960
DNA repair and recombination proteins [BR:
msut03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
LC048_09960
Archaeal homologous recombinant proteins
LC048_09960
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
AAA_29
AAA_21
Phage_GP20
COG6_N
WipA_N
SMC_N
ABC_tran
Motif
Other DBs
NCBI-ProteinID:
WLR57149
LinkDB
All DBs
Position
complement(1941346..1944483)
Genome browser
AA seq
1045 aa
AA seq
DB search
MKPLTLTMQAFGPYAGKETIDFKQLENRTMFVISGKTGSGKTTIFDGISYAIYGKASGED
RNGPDLRSQFADDELLTEVTLEFSLRQKTYQVTRSPQQEKKKKSGEGTTVVGAKAELSLI
DEKGELQLLASNVREVDEKIKEIMIIDSNQFRQILMIPQGEFRKLLTSDSKEKEVILQRL
FHTEIYKRVEEKLREEATVLKKSVEDQIEKRSSALRSIKAVENEELKEFVEAGSTNDTLI
LPLLKEEIGAMEAKLEKLNKDREKLQLDRDKMQQRLFEAEATLKQIQTLETLKITKDKLE
AQKDLFAEKEKQTILAKKAALLDAQEQLCHRLKADLERITNQVSVITKRIEQVTARLKAS
EIEHQKQIDREQERKAAAEQVNKLENMKEDVQAFASIASQFAELKQALAEAVQTREDNEA
RLKSTEERLKALQIEKEEAEKAKITYLENDRKLEKLLQELDKLKRLGNHNHKVKQVRSSF
ETRKGEFDQAVSRLNDAKAAAEALEQKWLHSQAAVLAASLHEGGACPVCGSENHPEPAKV
TEGFIPTEEDLKAAREQIAGIEKVKSAAEKSFIETDTTLRSMIELAEEMSAEIVKFRPDL
DVDQLADVVLLTESEIEKLQNEQKQYSVRIAALEKVKSEIKRYEDNRERMNKQLKAIEES
YQSLMIEYTEKKTTLGRMTEKIPEQLRSLQVFESKLKSAELSQKQLDEELEHARKNHQEA
KELLGTEKARMEEAEKRLKEIDSQLSAERETFKDNMTSQGFENYQAYHQAKISEQAIQQL
DTDISNYREEVRSVMDRFAELSDMLKDVKKPDMETLQSEFAQLNKLIKETEGAYQDLNLK
KRDNQSVLEQVTSLNEQMKLLEEKYKLVGQLFEISKGQNTYRITFERFVLASFLDDILAE
ANVRLNKMTSGRYRLLRKTDRSKGNVQSGLELLVLDAYTGQERHVKTLSGGESFKAALSL
ALGLADVVQNYAGGVSLETMFIDEGFGTLDPESLDQAIEALIDIQSSGRLVGIISHVPEL
KERIDARLEVISTQTGSRTEFHLMN
NT seq
3138 nt
NT seq
+upstream
nt +downstream
nt
atgaaacctctgacacttacgatgcaggcgttcgggccttatgccggaaaggaaactatt
gatttcaagcaactggagaacaggacgatgtttgtcatttctggtaaaacaggatcggga
aagacaaccatttttgatggtatcagttatgcgatttacggcaaggcaagcggtgaggat
cggaatggtcccgatttacgaagccagtttgcagatgatgaattattaaccgaagttacc
cttgaattttccttacgtcaaaagacttatcaggttaccagatctccgcagcaggagaag
aaaaagaagtctggtgaaggaacgactgttgtcggtgcaaaagcagaattatccttaatt
gacgaaaaaggtgaactgcaattgcttgcttcgaatgttcgcgaagtggacgaaaagatc
aaggagattatgatcatcgacagcaatcaattcaggcaaatactgatgattccccaagga
gaattccgtaagcttttaacatctgatagtaaagaaaaggaagtcattctgcaaaggctt
ttccatacggaaatttataagagagtagaggaaaaacttagggaagaagcgactgttctg
aaaaaatcggttgaggaccagattgagaaaagaagctcagcccttcgaagcatcaaggct
gtcgaaaatgaagaattgaaggaattcgtagaagcagggagtacaaacgataccttgatc
cttcctttattaaaagaagaaattggcgcaatggaagctaaactcgaaaagttgaacaag
gaccgtgaaaaacttcagctggaccgcgataaaatgcagcagcgattgtttgaagctgaa
gcaactttaaaacaaatccaaacactagaaacccttaagataacaaaggataagcttgaa
gcccaaaaggatctttttgccgaaaaagaaaaacaaaccattcttgcaaaaaaagctgcc
ctattggatgctcaggaacaactttgccaccggctcaaggccgatctcgaaagaattaca
aaccaggtaagtgtgatcacgaagcgaattgaacaggtaacagcacgactcaaagcatcc
gaaatagagcaccagaaacaaattgatcgcgaacaagagcgaaaggcagctgctgaacag
gttaacaagcttgaaaatatgaaagaagatgttcaagcattcgccagcatagcttcacag
tttgctgagctaaagcaagcactggcagaagcggtacagacacgggaggacaatgaagcc
aggcttaaatccactgaagagcgacttaaagccttgcagatagaaaaggaagaggccgaa
aaggccaagattacttatctggagaatgaccggaaattggaaaagctgcttcaagaattg
gacaagctgaaaaggctaggcaaccacaatcataaggtcaaacaggttcgatcaagcttt
gaaacccgcaaaggtgagtttgaccaggctgtttccagactgaatgatgccaaagctgca
gcagaagctcttgagcaaaaatggctgcattcacaggcggctgttttggctgcttctttg
catgaaggtggcgcttgccctgtttgcggatcagagaatcatcctgaacccgcgaaagta
actgaaggcttcatcccgacagaagaagatttaaaagctgcacgagagcagatcgctggt
attgaaaaagtgaagagtgctgctgaaaagtcttttatcgaaacagacacgacattaagg
tcaatgattgaattagcagaagaaatgtcggctgagatcgtcaaattccgtcctgactta
gatgtcgaccagttagcagatgtcgtactactgactgaaagtgaaattgaaaagctccaa
aatgagcagaaacagtattcggtaaggatagcagccctggaaaaagtcaaatctgaaatc
aaaaggtatgaagataacagagaaagaatgaacaagcagctgaaagctatcgaagaaagc
tatcaaagcctgatgatcgagtatacagaaaagaaaaccaccctcggtagaatgactgag
aaaatacctgaacagcttcgttcactacaagtgtttgagtcaaaactgaaatcagcagaa
ctctcacaaaagcagctggatgaggaactggagcatgcccgcaaaaatcatcaggaagcc
aaagaacttctgggaaccgaaaaagcacgaatggaagaagccgaaaagagattgaaggaa
atagactcgcaattgtcagctgagagagaaacatttaaagacaatatgacatcccagggc
tttgaaaattatcaggcctatcaccaggcgaaaatatcagaacaggctattcaacagctt
gatacagatatttcgaattatcgtgaagaagtcaggtcagtaatggatcgtttcgcagag
ctgtctgacatgctaaaagatgtcaagaagcctgatatggaaacacttcaatcagaattc
gcacaactaaataaattaatcaaagaaacagaaggcgcatatcaggatttaaatctaaaa
aaacgtgataatcaatctgttttggaacaggtaacatctttgaatgagcagatgaagctg
cttgaggaaaagtacaaattagtcggccaattattcgagatttcaaaaggccagaacaca
tacaggattacattcgaacgctttgtcctggcatctttcctggatgatattcttgcagag
gctaacgtaagactcaacaagatgacgagcggacgataccgattactgagaaagactgat
cgttcaaaaggtaatgtgcagagtggattggagctattggttctggatgcatatacaggt
caggagcgacatgtaaaaacattatctggcggagaaagcttcaaagctgcattatcactt
gccctcggtttggccgatgttgtccagaattacgcaggtggagtttcattagagaccatg
ttcatcgatgaaggcttcggtacacttgatccagaatccctggaccaggctattgaagca
ttaattgatatccagagcagcggccggctcgtcggaatcatctcccatgtaccagagcta
aaggaacggatcgacgcaaggctcgaggtcatctccacccagacaggaagcagaacagaa
tttcacttaatgaattaa
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