Mesobacillus subterraneus: LC048_12660
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Entry
LC048_12660 CDS
T09285
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
msut
Mesobacillus subterraneus
Brite
KEGG Orthology (KO) [BR:
msut00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
msut03016
]
LC048_12660 (truB)
Enzymes [BR:
msut01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
LC048_12660 (truB)
Transfer RNA biogenesis [BR:
msut03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
LC048_12660 (truB)
Prokaryotic type
LC048_12660 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
AmiA-like
Motif
Other DBs
NCBI-ProteinID:
WLR53393
LinkDB
All DBs
Position
complement(2439330..2440247)
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AA seq
305 aa
AA seq
DB search
MEGILPLFKPAGMTSHDCVFKLRKLLKTRKVGHTGTLDPDVTGVLPICVGKATKIAEYIT
DAGKAYEGEVTLGFTTTTEDASGEKVEEKIVDRLITRGEILQVLQSLEGVIEQTPPMYSA
VKVNGKKLYEYARQGIEVERPTRKVTIYGIELLDDRDSFTGEHVSFKFRVSCSKGTYIRT
LAVTIGEKLGYPAHMSALVRIQSADFTIEDCYTFGQLEKLAEESDLEAALHPLEAGISYL
PKYRINDKVAEKVKNGALLTIPEGFKGVDGPIVVETEDGKALAIYRAHPTKPGVMKPDKV
LRNEQ
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
atggaagggattctgcctctatttaaaccagcgggaatgacttctcatgattgtgtgttt
aagctcaggaaacttttaaaaacaagaaaggtaggacatacagggacacttgatcctgat
gtgactggagtattgccaatttgtgttggcaaggcgacaaaaattgctgaatacattaca
gatgcaggaaaggcgtatgagggtgaagtcacgcttggattcacgaccactaccgaagat
gcttcaggtgagaaggtcgaagaaaaaatagtggacaggctcataacgagaggcgaaatc
ctacaggtcctgcagtcgctggagggcgtaattgagcaaacccctccgatgtattcagct
gtaaaagtaaacgggaaaaaattatacgaatacgcgagacaagggattgaagttgaaaga
ccgaccaggaaggtcacgatctatggcatagagcttcttgatgacagggattcatttact
ggtgaacatgtaagctttaaattccgggtatcatgcagcaaggggacatacattcgaaca
ttggcagtgacgataggggaaaaattgggttatcccgctcatatgtctgcccttgttaga
atacaatccgctgacttcactattgaggattgctatacttttggacagcttgaaaaatta
gccgaagaaagcgatcttgaagctgctctgcacccattagaagctggtatttcttatttg
ccgaaatatcgcattaatgataaagtagcagagaaagtgaaaaatggggcattgcttacg
atcccggagggttttaagggagttgatggccctatcgtagtagaaacagaagacggaaaa
gcgctcgcaatctacagggcacaccccaccaaacctggggtgatgaagcctgataaagtt
ctaagaaatgagcagtag
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