Mesobacillus subterraneus: LC048_19580
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Entry
LC048_19580 CDS
T09285
Name
(GenBank) exonuclease domain-containing protein
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
msut
Mesobacillus subterraneus
Pathway
msut03030
DNA replication
msut03430
Mismatch repair
msut03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
msut00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LC048_19580
03430 Mismatch repair
LC048_19580
03440 Homologous recombination
LC048_19580
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
msut03032
]
LC048_19580
03400 DNA repair and recombination proteins [BR:
msut03400
]
LC048_19580
Enzymes [BR:
msut01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
LC048_19580
DNA replication proteins [BR:
msut03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
LC048_19580
DNA repair and recombination proteins [BR:
msut03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
LC048_19580
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
BRCT
Rv2179c-like
nsP3_ZBD
BRCT_2
DNA_pol_A_exo1
Motif
Other DBs
NCBI-ProteinID:
WLR54601
LinkDB
All DBs
Position
3762574..3763515
Genome browser
AA seq
313 aa
AA seq
DB search
MDFISIDFEIANNSLTSACSMGITFVHDNEIIDEKYYLIHPPTNNFDPEMTAVHGIEPRH
VLSAPKFNNIWEEINHHFKDTFIVAHNAQFDMSVLYACLKEYELEVPDFSYICSIPISTK
ATRGLKIGNSLKERAEHFSIQLPEHHNALADARACAELVIKSVESKNYTSLKSYLTKHKS
IPVRKFSELKPQTHLYKRKTFNRVKPSEITSTVDHFNEEHPFYNKNFVFTGELQAIDRKA
AMQRVVNLGGIIKSGVSSKTDYVIVGHQDKSLVGEKGLSTKEVKAYSLIEQGIEITVLNE
NEFTNLLNVRTEV
NT seq
942 nt
NT seq
+upstream
nt +downstream
nt
atggattttatttcaatagattttgagattgcgaataatagtttgaccagtgcctgttca
atgggtattacctttgtccatgacaacgagatcatcgatgaaaagtattatctaatacat
ccacctacaaacaattttgaccctgagatgactgctgtgcatgggattgagcctcgacat
gtcctttcagcaccaaaattcaataatatttgggaggaaatcaaccatcatttcaaggat
acttttatcgtcgcacataatgcacaatttgatatgagcgtcctatacgcttgcctaaaa
gaatatgaattagaggtaccggatttcagttatatttgcagtatccctataagtaccaag
gctactcgcggtttaaaaattgggaattcattaaaagaaagagcagagcattttagcata
caacttcccgagcaccataatgcattggcagatgctcgtgcttgtgctgaacttgtcatc
aaaagtgtcgagagtaagaactacacatctttaaaatcatatttaacaaagcacaaaagc
attccagtgagaaaattctctgaactcaaaccacaaacacatctctacaaaagaaaaacc
ttcaatagagttaagccatccgagataacatctaccgtagaccacttcaacgaggaacat
cctttttacaataaaaactttgtctttactggtgaactccaggctattgacagaaaagcc
gccatgcaaagggttgtgaacctaggcgggataattaaatccggggtttcaagtaaaact
gattacgttattgttgggcatcaagacaaatctttggttggtgaaaaaggattaagtaca
aaagaagtaaaggcttatagccttatagagcaaggaatagagataacagtacttaatgaa
aacgagtttacaaatttactaaatgtacgaactgaggtgtaa
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