Mesobacillus subterraneus: LC048_22135
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Entry
LC048_22135 CDS
T09285
Symbol
truA
Name
(GenBank) tRNA pseudouridine(38-40) synthase TruA
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
msut
Mesobacillus subterraneus
Brite
KEGG Orthology (KO) [BR:
msut00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
msut03016
]
LC048_22135 (truA)
Enzymes [BR:
msut01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
LC048_22135 (truA)
Transfer RNA biogenesis [BR:
msut03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
LC048_22135 (truA)
Prokaryotic type
LC048_22135 (truA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
DUF2344
DUF4026_N
Motif
Other DBs
NCBI-ProteinID:
WLR55004
LinkDB
All DBs
Position
complement(4246932..4247696)
Genome browser
AA seq
254 aa
AA seq
DB search
MPRIKCTISYDGTGFSGYQVQPGKRTVQGELEKTLERLNKGTSIRVNASGRTDAGVHARG
QVIHFDTTLEIEPARWLKALNSLLPDEIAVLSVDIAESDFHARFDAVGKEYRYFLLLSKH
RNPFQRNYAYQFQYELDLEAMREASKQLLGTHDFTSFCSARTEVEDRVRTLKEIDFYEEN
GLLVLRFVGDGFLYNMVRILVGTLLEVGAGRRAPNSMLQLLEDMDRTRAGKTAPGHGLYL
WKVFYNEKELAIRK
NT seq
765 nt
NT seq
+upstream
nt +downstream
nt
atgccgcgaatcaaatgcacaatttcatacgatggcacaggtttttctggctaccaggtt
cagccaggaaaaaggactgtccagggtgagctggaaaagacccttgaaaggctgaacaag
ggtacaagcatcagggtcaatgcgtcaggccgtacagacgcaggagtccatgcccgcggt
caggtcatccattttgacacaacgcttgaaattgagcctgccaggtggctaaaagcgctt
aattcattattacctgatgaaattgccgttctttcagtagatatagcggaatccgatttc
catgcacgctttgatgccgtcggcaaggagtaccgttatttcttgctgctgtcaaagcat
cggaaccctttccagcgcaactatgcttaccaattccagtatgaactcgatcttgaggca
atgagagaagctagcaaacagttgttagggacacatgacttcactagtttttgctcagcc
agaacagaagtagaggacagggtaagaaccttgaaggaaatcgatttttacgaggagaac
ggtctgctggtattaaggtttgtcggtgatggctttctgtacaatatggtaagaatcctg
gttgggacattactggaggtcggggcaggcaggagagcaccaaacagcatgctgcagctg
cttgaggacatggaccgtaccagggcgggcaagactgcccctggacatggactgtacttg
tggaaggtcttttataacgaaaaagagttagcaattcgaaaataa
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integrated database retrieval system
