Microbacterium suwonense: GCM10025863_01020
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Entry
GCM10025863_01020 CDS
T09270
Symbol
topA
Name
(GenBank) DNA topoisomerase 1
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
msuw
Microbacterium suwonense
Brite
KEGG Orthology (KO) [BR:
msuw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
msuw03032
]
GCM10025863_01020 (topA)
03400 DNA repair and recombination proteins [BR:
msuw03400
]
GCM10025863_01020 (topA)
Enzymes [BR:
msuw01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
GCM10025863_01020 (topA)
DNA replication proteins [BR:
msuw03032
]
Prokaryotic type
DNA Topoisomerases
GCM10025863_01020 (topA)
DNA repair and recombination proteins [BR:
msuw03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
GCM10025863_01020 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
Toprim_4
Toprim_2
Motif
Other DBs
NCBI-ProteinID:
BDZ37488
LinkDB
All DBs
Position
98976..101831
Genome browser
AA seq
951 aa
AA seq
DB search
MTATILTSASGHGRRVAATLCPLQESGVYGVLRRKDALLAQGKKLVIVESPTKMRSIQGY
LGDDYEVLSSVGHIRDLADKKDIPAADKQAYGKYSIDVENDFDPYYVVSDRKTKTVAELK
RALKNADELLLATDEDREGEAIAWHLLETLKPKVPVKRMVFHEITKDAIQAAVNRTRELD
LALVDAQETRRILDRLYGWDISPVLWYKVKSGLSAGRVQSAATRMIVDRERERMAFTSAE
YWDVEAQAATAGQGFGVRLVRIDGGQLARGTDFDDTGKLKKAVVVLSEADAAAIAAAVDA
AGSATVSKVEAKPGTRSPYAPFTTSTMQQEAGRKLSMSAKQAMSVAQRLYEKGYITYMRT
DSVALSTQAVQAARSQAVALYGDAAVPLKPRVYKSKSKNAQEAHEAIRPSGEKFRTPASV
ASGLDREEQRLYDLIWKRTVASQMSDAKYETTTVTLEAQANDKRLEFTASGTVYTFKGFL
EAYEEGRDEKRNAQDSAENQSLPAVAVGDELGMSDAEAKGHRTTPKPRYTEASLVKALEE
HGIGRPSTFASIIGTVIDRGYASKRGQALVPTWLAFSVVRLLEQHFAELIDYDFTAALED
DLDAIARGEQNRNEWLRSFYFGSDAHVGLRQVVDNLGEIDARALNSTRITDTVTLRFGKY
GPYLEVIDPAKPDERGRIVNVPDDLAPDELTAEKAQELVDAPVAGDRVLGENPENGRIIV
VKDGRYGPYVQENLPEEDPVVDEKTGEVAAAPKKKTAKKDAPKPRTGSLFRSMSVETIDI
ETALRLLSLPRVVGTDPESGDEITAQNGRYGPYLKKGADSRSLESEQQIFDITLDEALAI
YAQPKYGAGSRRAASALAEFDADPVSGKAIRVRDGRFGPYVTDGETNVTIPRGQKPEDIT
FEIAVQMLADKRAKGPAPKRGRRRPRRRSPGEEGCRQEGSCQEGSGQEGCR
NT seq
2856 nt
NT seq
+upstream
nt +downstream
nt
atgacggcgacgatcctcacttccgcctccggccatggccgccgtgtcgctgcgacgctg
tgtccgctgcaggagagcggtgtgtatggtgtgcttcggagaaaggacgcactcttggca
caaggcaagaagctcgtcatcgtcgagtccccgacgaagatgcgatctatacaggggtac
ctcggcgacgactacgaagtgctcagctccgtcggtcacatccgcgacctggcagacaag
aaggacatccccgccgccgacaagcaggcgtacgggaagtactcgatcgacgtcgaaaac
gacttcgacccgtactacgtcgtctccgatcgcaagacgaagacggtcgccgaactcaag
cgcgcgctgaagaacgccgacgagctcctgctcgccactgatgaggaccgcgagggcgag
gcgatcgcctggcacctgctggagaccctcaagccgaaggtgcccgtcaagcggatggtc
ttccacgagatcaccaaggacgcgatccaggccgccgtcaatcgcacccgcgaactcgac
ctggcgctcgtcgacgcacaggagactcgccgcatccttgatcggctgtacggctgggac
atctcaccggtgctctggtacaaggtcaagtccggcctgtcggccgggcgcgtgcagtcc
gccgcgacccgcatgatcgtcgaccgtgagcgggagcggatggcgttcacctccgccgag
tactgggatgtcgaggcgcaggccgctaccgcagggcagggcttcggcgtgcgcctggtg
cgcatcgacggcggtcagctcgcccgcggcaccgacttcgacgacaccggaaagctgaag
aaggccgtcgtcgtgctcagcgaggcggatgccgcggccatcgccgccgccgtcgacgca
gcaggcagcgccacggtcagcaaggtcgaggccaagcccggtacgcgcagcccctacgcc
ccattcaccacctccaccatgcagcaggaggccggccgcaaactctcgatgagtgcgaag
caggcgatgagcgtcgcccagcgcctgtacgagaaggggtacatcacctatatgcgcacc
gactcggtcgcgctgagcacgcaagccgtccaggccgcgcgcagccaggccgtcgccctg
tacggcgacgcggccgtgccgctgaagcctcgggtgtacaagtccaagagcaagaacgcg
caggaggctcacgaggccatccgcccgtcgggcgagaagttccgcacgccggcatccgtc
gcatcgggcctcgaccgcgaggagcagcggctctacgacctgatctggaagcgcaccgtt
gccagtcagatgtcggatgccaagtatgagacgaccacggtcaccctcgaggcgcaggcc
aacgacaagcggctcgagttcacggcatccggcaccgtctacacgttcaaggggttcctg
gaggcgtacgaagagggccgcgacgagaagcgcaacgcgcaggactccgccgagaaccag
tcgctgccggccgtcgccgtgggcgatgagctggggatgtcggatgccgaggccaagggc
caccgcaccacgccgaagccccgctacaccgaggcgtcgctggtgaaggcgctcgaagag
cacggcatcgggcgtccgtcgacgttcgcgagcatcatcggcacggtgatcgaccgcggc
tatgcgagcaagcgcggccaggcgctggtgcccacctggttggccttcagcgtggtgcgt
ctgctcgagcagcatttcgccgagctgatcgactatgacttcaccgccgcgctcgaagac
gacctcgacgcgatcgcccgcggcgagcagaaccgcaacgagtggctgcgttccttctac
ttcggctccgacgcgcacgtcggcctgcgccaggtggtcgacaacctcggcgagatcgat
gcgcgcgcgctgaactccacgcgcatcaccgatacggtcacgctgcggttcggcaagtac
ggtccgtacctcgaggtgatcgacccggccaagcccgatgagcgcgggcggatcgtcaac
gtccccgacgatctcgcccccgatgagctgaccgccgagaaggcgcaggagctcgtcgac
gccccggtcgccggggaccgcgtgctcggagagaaccccgagaacggccgcatcatcgtc
gtcaaggacggccgctacggcccctacgtgcaggagaacctgcccgaagaggatccggtc
gtcgacgagaagaccggcgaggtggccgccgcgccgaagaagaagaccgcgaagaaggac
gcgcccaagccgcgcaccggttcgctgttccgctcgatgtcggtggagaccatcgacatc
gagaccgcgctgcgcctgctcagcctgccgcgcgtcgtgggcaccgaccccgagtccggc
gatgagatcaccgcgcagaacggccgctacggcccctacctgaagaagggcgccgattcg
cgctcgctggagagcgagcagcagatcttcgacatcacgctcgacgaggcgctggcgatc
tacgcgcagccgaagtacggtgcgggatctcgccgggccgccagcgcgctcgccgagttc
gacgccgatccggtcagcggcaaggcgatccgcgtgcgcgacggccggttcggtccctac
gtgaccgacggcgagaccaacgtgacgatcccgcgtggtcagaagcccgaggacatcacc
ttcgagatcgccgtgcagatgctcgccgacaagcgcgccaaggggccggctcccaaacgg
gggcgaagaaggccccggcgaagaagccccggcgaagaaggctgccgccaagaaggctcc
tgccaagaaggctccggccaagaaggctgccgctaa
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