Microbacterium suwonense: GCM10025863_09180
Help
Entry
GCM10025863_09180 CDS
T09270
Name
(GenBank) hypothetical protein
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
msuw
Microbacterium suwonense
Pathway
msuw03030
DNA replication
msuw03410
Base excision repair
msuw03420
Nucleotide excision repair
msuw03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
msuw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
GCM10025863_09180
03410 Base excision repair
GCM10025863_09180
03420 Nucleotide excision repair
GCM10025863_09180
03440 Homologous recombination
GCM10025863_09180
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
msuw03032
]
GCM10025863_09180
03400 DNA repair and recombination proteins [BR:
msuw03400
]
GCM10025863_09180
Enzymes [BR:
msuw01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
GCM10025863_09180
DNA replication proteins [BR:
msuw03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
GCM10025863_09180
DNA repair and recombination proteins [BR:
msuw03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
GCM10025863_09180
NER (nucleotide excision repair)
GGR (global genome repair) factors
GCM10025863_09180
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF885
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_polI_exo1
HHH_2
TraI_hel_assoc_N
Motif
Other DBs
NCBI-ProteinID:
BDZ38304
LinkDB
All DBs
Position
874801..879117
Genome browser
AA seq
1438 aa
AA seq
DB search
MTDSAKPTLMVVDGHSLAYRAFFALPVENFTTRDNQHTNAIYGFLSMLVNLIKAEKPSHM
AIAFDTSRHSFRTEEYPEYKATRSESPQEFRGQIPLLQECLAAMSIPVLTKEGIEADDIL
ATLARQGTEQGYQVLVVSGDRDSIQLVNDEVTLLYPSVQGVSQLKRYDPDAVLERYGVRP
EQYPDIAALVGETSDNLPGVPKVGEKTAVKWLTQFGSLDELLERAGEIKGVVGGNLREHI
EDVRRNRRLNRLLNDVELPLGPAELAVAPIDAQALRDVFARLEFRTLLPRVFEAVGATDE
PVHDEPAVSIPEPTEASASEIAAWLSGHTGETGLTLVLEGTTITRIGVAHGDELREGDWS
DDTAAALRAWLESDSPKVLNDAKPQVKALLRVGIRLGGLSYDTLLAGWLMRPSFPDKTLA
HLVGRYLDEKLPEADPTQLVPETDGATPSQEAWFTLRTAAALREAMPASVASVLTDIELP
TLMTLADMELAGVAVSHDVLSTFSGELLSRTDRLAAEAFELVGREFNLGSPKQLQEVLFE
DLQLPKTRKTKTGYSTDAAVLADLQETNPHPFLDLLLQHREATKLRQIIESLDTAIGEDH
RIHTTYVQTGSQTGRLSSTDPNLQNIPVRTEESRRIRSAFEVGDGYETLLTADYSQIEMR
IMAHLSGDANLIQAFNSGEDLHRFVGSRVFGVQPEEVTSAMRTKVKAMSYGLVYGLSAFG
LSKQLRIEQSEAKQLMQEYFARFGAVRDYLRASVLQAKEDGYTETIFGRRRPFPDLSSPN
RVLRENAERAALNAPIQGSAADIMKLALFRIHSDLRDAALRSRVLLQIHDELVVEIAPGS
GRPSRRSYASRWRVRRSSPFRWMFRWDEAGTGTRRRTRLESMTAQPRTPSAIDQVAERWV
DTLVDLSPVLATYIGRNEANGRLDDLSPEGHERSVAAAREALTELDALDPADEIDRITKT
DLSAELRLQIELHEAQWHLRDLNVIASAPQDFRQAFDLMPTAQAEDWGVIAERLAALPAA
LKGYTQTLREGIRQGIMPARRQVTEVAAQIARYTADDGFFASFVAEAAPEEGQLPASLAK
DLADLSGAARVAYDELRTFLSGELAAAAPEQDAVGRELYALNSRRFLGATIDLDETYEWG
REELDRMIAEQNSIANEILPGATVEEAVAHLEADPSRKLHGTEALQQWMQQTSDRAIADL
GASHFDIPEQIRELECMIAPTQEGGIYYTGPTDDFSRPGRMWWSVPEGVTEFDTWRELTT
VYHEGVPGHHLQIAQATYNRAELNTWRRVLAGTSGHAEGWALYAERLMEQLGYLDDPADR
LGMLDGQRMRALRVVLDIGVHLGKPRLEGDGIWDYDYAIELMRRNVNMPDEFRRFEVNRY
LGWPGQAPSYKVGQRIWEQVRDAVRAQEGEAFSFKAFHKRALDLGGVGLDTLRSAFLG
NT seq
4317 nt
NT seq
+upstream
nt +downstream
nt
gtgacggactccgcaaagcctaccctcatggtcgtcgacggccactcgctcgcctaccgg
gccttcttcgcccttccggtcgagaatttcacaaccagggacaaccagcacacgaacgcc
atctacggcttcctgtcgatgctggtgaacctgatcaaggccgagaagccctcgcacatg
gcgatcgccttcgacacctcgcggcactcgttccgcaccgaggagtaccccgagtacaag
gcgacgcgctcggagtcaccgcaggagttccgggggcagatcccgctgctgcaggaatgt
ctcgctgcgatgtcgatcccggtgctcacgaaggagggcatcgaagcggacgacatcctc
gccacccttgccaggcagggcaccgagcagggctaccaggtgctcgtcgtctcgggcgac
cgtgactcgatccagctggtgaacgacgaggtgacgctgctgtacccctcggtgcagggc
gtctcgcagctcaagcgctacgacccggatgccgtgctggagcgctacggcgtgcgcccg
gagcaataccccgacatcgctgcgctggtgggggagaccagcgacaacctcccgggcgtt
ccgaaagtgggggagaagacggcggtgaagtggctgacacagttcggctctctcgatgag
ctgctggagcgcgccggggagatcaagggcgttgtgggcggcaacctgcgtgagcacatc
gaggacgtacgccgcaatcgccgcctgaaccggctgctgaacgatgtggaactgcctctg
gggccggccgagctcgccgtcgcgcccatcgatgcgcaggcgctgcgtgacgtgttcgcc
aggctggagttccgcacgctgctcccacgcgtgttcgaagcggtcggcgcgaccgacgaa
cccgtgcacgacgagcccgccgtgtcgatcccggaaccgacggaggcctcggcatccgag
atcgccgcgtggctgtccggccacaccggcgagacggggctgacgctggttctcgagggc
accacgatcacgcggatcggtgttgcgcacggcgatgagctgcgcgagggcgattggagc
gatgacaccgccgcggcgctgcgcgcctggttggagtccgattccccgaaggtgctcaac
gacgccaagccgcaggtgaaggcgctcctgcgggtcggcatccgtctgggcgggctgtcg
tacgacacgctgctggccggctggctgatgcgccccagctttcccgacaagaccctcgcg
cacctggtcggacgctatctcgacgagaagcttcccgaggccgaccccacccagctcgtc
cccgagaccgacggcgcgacgccctcccaggaggcgtggttcacgctgcgtaccgccgct
gccctgcgtgaggcgatgcccgcatccgtggcatccgtgctcaccgacatagagcttccc
accctgatgacgttggccgacatggagctcgccggcgtcgcggtctcgcacgacgtgctc
tccaccttctccggcgagctgctcagccgcaccgaccgcctcgccgctgaggcgttcgag
ttggtcgggcgcgagttcaatctcggctctcccaagcagctgcaggaagtgctcttcgag
gacctgcagctgcccaagacccgcaagaccaagaccgggtactccacggatgccgcagtg
ctggccgacctgcaggaaacgaatccgcatcccttcctggacctgctgctgcagcaccgc
gaggccaccaagctccgccagatcatcgagtcgctcgacacggcgatcggcgaggatcac
cgcatccacaccacctatgtgcagacgggcagccagaccggtcggctctccagcaccgat
ccgaacctgcagaacatccctgtgcgcaccgaggagtctcgtcgcatccgcagcgccttc
gaggtgggcgacggctacgagacactgctcacggccgactattcgcagatcgagatgcgg
atcatggcacatctctccggcgacgcgaatctgatccaggcgttcaactcgggtgaggat
ctgcaccgcttcgtcggctcccgcgtcttcggcgtgcagcccgaggaggtcacctcggcg
atgcgcaccaaagtgaaggcgatgtcgtacggcctggtgtacggtctcagcgcgttcggc
ctgtccaagcagctgcggatcgagcagtccgaggccaaacagctcatgcaggagtacttc
gcccggttcggggcggtgcgcgactatctgcgcgcgtcggttctccaggcgaaggaagac
ggttacaccgagacgatcttcggccggcggcgcccgttccccgacctgtccagtccgaat
cgggtgctgcgcgagaacgccgagcgggctgctctgaacgcccccatccagggaagcgcg
gccgacatcatgaagctcgcgctgttccgcatccattccgacctgcgcgatgcggcgctc
cgctcacgcgtgctgctgcagatccacgacgagctggtcgtggagatcgccccggggagt
gggaggccgtcgaggcgatcgtacgcgagcagatggcgggtgcggcggagctctccgttc
cgctggatgttcaggtgggacgaggccgggactggaacgaggcggcgcactaggctcgaa
tccatgactgcacaaccgcgcaccccgtccgcgatcgaccaggtcgccgagcgctgggtg
gacacgctcgtcgacctgtctcccgtgctggcgacctacatcggacgcaacgaggccaac
ggcaggctggacgatctgagccccgaggggcatgagcgctccgtcgccgccgcgcgggag
gctctcacggaactggatgccctggatcccgccgacgagatcgatcgcatcaccaagacc
gatctgtctgccgaactgcgcctgcagatcgagctgcatgaggcgcagtggcacctgcgc
gacctgaacgtgatcgcctcggcaccgcaggatttccgccaagcgttcgatctcatgccc
accgcacaggcggaggactggggtgtgatcgccgaacggctcgccgcgctgccggcggcg
ctgaagggctacacgcagaccctgcgagagggcatccgtcagggcatcatgcccgcccgg
cgccaggtgaccgaggtggccgcgcagattgcgcgctacaccgccgacgatggcttcttc
gcctcgttcgtcgccgaggcggcacctgaggagggtcagcttccggcatccctcgcgaag
gacctcgccgatctctccggtgcggcgcgcgtcgcctacgacgagctgcgcacattcctc
tccggcgagctcgcggccgccgctcccgagcaggatgccgtcgggcgcgagctctacgca
ctgaactcccgccgattcctgggtgccacgatcgacctggacgagacctacgagtggggg
cgcgaggaactcgatcggatgatcgccgagcagaactcgatcgcgaacgagatccttccc
ggggcgaccgtcgaagaggccgtcgcgcacctcgaagccgatccctcgcgcaagctgcac
ggcaccgaggcactgcagcagtggatgcagcaaaccagcgacagggcgatcgccgacctg
ggcgccagccacttcgacatcccggagcagatccgcgagctggaatgcatgatcgccccc
acgcaggaaggcggcatctactacacgggccccaccgatgacttctcccgtccgggacgg
atgtggtggtcggtgccggagggcgtgaccgagttcgacacctggcgcgagctgaccacc
gtgtaccacgagggcgttcccggccaccatctgcagatcgcgcaggccacctacaaccgt
gccgagctgaacacctggcggcgggtgctggccggcacctccggacacgccgagggctgg
gccctgtacgccgagcgtctcatggagcagctgggctacctcgacgaccccgccgaccgg
ctgggtatgctcgacggtcagcgcatgcgcgccttgcgcgtggtgctcgacatcggggtg
cacctgggcaagccgcgcctggagggcgatggcatctgggactacgactacgcgatcgag
ctgatgcgacgcaacgtgaacatgcccgacgagttccgccgcttcgaggtgaaccgctac
ctgggctggccggggcaggctccctcctacaaggtcggtcaacggatctgggagcaggtg
cgcgatgcggtgcgcgcgcaggagggcgaggccttctcgttcaaggcgttccacaaacgc
gcgctggacctgggcggtgtgggcctggacacacttcggtcggcgttcctgggctga
DBGET
integrated database retrieval system
