Microbacterium suwonense: GCM10025863_16250
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Entry
GCM10025863_16250 CDS
T09270
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
msuw
Microbacterium suwonense
Pathway
msuw03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
msuw00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
GCM10025863_16250
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
msuw03019
]
GCM10025863_16250
03400 DNA repair and recombination proteins [BR:
msuw03400
]
GCM10025863_16250
Enzymes [BR:
msuw01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
GCM10025863_16250
Messenger RNA biogenesis [BR:
msuw03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
GCM10025863_16250
DNA repair and recombination proteins [BR:
msuw03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
GCM10025863_16250
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
RecQ_Zn_bind
Pribosyltran
HEM4
Zn_ribbon_TFIIB
KORA
Motif
Other DBs
NCBI-ProteinID:
BDZ39011
LinkDB
All DBs
Position
complement(1532159..1534270)
Genome browser
AA seq
703 aa
AA seq
DB search
MRQSGGMTSADTRAAALDALRDLVGRADADFHDGQYEAIEALVEGRRRALVVQRTGWGKS
AVYFVATLLLRRQGAGPTVLVSPLLALMRDQIAAAQRAGVRAVAINSTNAHEWEDVLAQL
DRDEVDVLLVSPERLNNPAFREQRLPALIGRIGMLVVDEAHCISDWGHDFRPDYRRLREL
IAGMPADVPVLATTATANSRVVADVAEQLESGGGEVLTIRGPLARASLRLGVLRLPGSAQ
RLAWLLSHLDELPGSGIIYTLTVAAAVDTARLLREHGHEVRAYTGQTDAEEREESERMLK
RNEVKALVATSALGMGFDKPDLGFVLHLGAPSSPVAYYQQVGRAGRASDSADVLLLPGAE
DRDIWHYFATASMPDQQRAERVIAALGEAPISTPALEAMVDIRRTPLELLLKVLDVDGAV
RRVQGGWVATGQPWIYDAERYERIAAERRAEQQHMLEYQQTNGCRMEFLQRSLDDDTAAP
CGRCDNCAGVWFPSDVAADAGATAAESLDRVGVPIEPRKQWPTGADRLGVPAKGRIGAEE
QAAEGRALARLTDLGWGGTLRELFAAGAPDASVPPQVRGACVRVLAGWGWDERPVAVVGM
PSRSRPQLVDSLARGLAEIGKLPYVGALGFANGGPTGGPGGNSAFRLAGLWDRFTAEGLE
IPAGPVLLVDDLADSRWTLTVAARTLRRAGATAVLPFVLAQRG
NT seq
2112 nt
NT seq
+upstream
nt +downstream
nt
gtgcggcagagtggtggcatgacttccgccgacacgcgtgccgccgctctcgacgctctg
cgcgatctcgtcgggcgtgcggatgccgacttccacgacggccagtacgaggcgatcgag
gcgctggtcgagggacgccgccgagcgctggtcgtgcagcgcacggggtggggcaagtcg
gcggtgtacttcgtcgcgaccctcctgctgcgccgtcagggcgccggccccacggtgctc
gtctcgccgctgctggcgctcatgcgcgaccagatcgcggccgcccagcgcgcgggggtg
cgggcggtcgccatcaactcgaccaacgcgcacgagtgggaggacgtgctcgcgcagctc
gatcgtgacgaggtcgacgtgctgctggtctctccggagcggctgaacaacccggctttc
cgtgaacagcggctgccggcgctgatcggccggatcgggatgctggtggtcgacgaggcg
cactgcatcagcgactgggggcatgatttccgccccgactaccggcggctgcgcgagctg
atcgccgggatgcccgccgacgttccggtgctcgcgacgaccgccacggcgaacagccgg
gtggtggccgatgtcgccgagcagctggagtccggaggaggcgaggtgctgaccatccgc
ggtccgctggcacgtgcgtccctgcgcctgggtgtactgcggctgcccgggtcggcgcag
cggctggcctggctgctcagccacctcgatgagcttcctggctccggcatcatctacacg
ctcaccgtcgcggcggcggtcgacaccgcacgactgctgcgcgagcacgggcacgaggtg
cgtgcgtacaccgggcagacggatgccgaggagcgcgaggaatccgagcggatgctcaag
cgcaacgaggtgaaggcgctcgtcgccacgagcgcgctggggatggggttcgacaagccg
gatctcggtttcgtgctgcacctcggtgcgccctcctcgcctgtggcgtattaccagcag
gtcggtcgcgccgggcgcgccagcgacagcgctgatgtgctgctgctgcccggggccgag
gaccgcgatatctggcattacttcgcgaccgcctccatgccggaccagcagcgggcagaa
cgtgtgatcgcggcgctcggcgaggccccgatctcgaccccggcgctggaggcgatggtc
gacatccgccgcactccgctcgagttgctgctgaaggtgctcgacgtggacggcgcggtt
cgtcgcgtgcagggcgggtgggtcgcgaccggtcagccctggatctacgatgccgagcgc
tacgagcgcatcgcggccgagcgccgcgccgagcagcagcacatgctcgagtatcagcag
acgaacggatgccggatggagttcctgcagcgctcgctcgatgacgacactgcagctccc
tgcggccggtgcgacaactgtgcgggcgtgtggttccccagcgacgtcgcggcggacgcg
ggtgccaccgccgccgagtccctcgaccgggtcggagtgccgatcgagccgcgcaagcag
tggccgaccggtgccgatcggctcggcgtgccagccaaggggcgcatcggcgcggaggag
caggccgccgagggacgggcgctggcccgcctgaccgacctgggctggggcggcacgctg
cgagagctgttcgcagccggcgctccggatgccagtgtgccgccgcaggtgcggggagcc
tgcgtgcgcgtgctcgccgggtggggctgggatgagcgtccggtcgccgtggtcgggatg
ccgtcacgctcgcggcctcagctggtcgactcgctcgcccgcggcctcgccgagatcgga
aagctgccgtatgtcggcgcgctcgggttcgcgaacggcgggcccaccggcggcccgggc
ggcaacagcgccttccggctcgcgggcctgtgggatcggttcaccgccgaagggctggaa
atcccggccgggccggtgctgctggtcgatgacctggccgacagccgctggaccctcacg
gtcgccgcgcgcacgctgcgccgggccggggccacggcggtgctgccgttcgtgctggcg
cagcgcggctaa
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