Microbacterium suwonense: GCM10025863_20780
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Entry
GCM10025863_20780 CDS
T09270
Name
(GenBank) hypothetical protein
KO
K03579
ATP-dependent RNA helicase HrpB [EC:
5.6.2.6
]
Organism
msuw
Microbacterium suwonense
Brite
KEGG Orthology (KO) [BR:
msuw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
msuw03019
]
GCM10025863_20780
Enzymes [BR:
msuw01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
GCM10025863_20780
Messenger RNA biogenesis [BR:
msuw03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
GCM10025863_20780
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HrpB_C
HA2_N
Helicase_C
CON_HrpB
RoxA-like_Cyt-c
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
BDZ39464
LinkDB
All DBs
Position
1984219..1985934
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AA seq
571 aa
AA seq
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MIRGRRTDQPPRIIVTTSLAESSLTVPGVRLVVDSCLARHPQRDASRGMSGLVTSAASRS
SCVQRAGRATRQGSGTVIRCVDERTYAAAPARPAPEIATTDLTDAALLLACWGAPQGTGL
RLIDPLPADSLADAVTVLKSLGAVDDDGRATDDGRALARIPTDPRLARALRDGGPLVGSR
LAAEVVALLGGDLRLTDADVAGAIVALRNGRRPDAGRWARDVTRLQRLVPSAPGIGAGTD
AVGLVIALAYPERIARRMERSADGARFLLASGTRAGVRGSLADAGWLAVADVARASGRAA
AGSGAIIRAAAVISEEHLEQVAGPLMTDRVEAQFTDGRVQARRERRVGAIVRSSGPVRAT
ADEGRDAVRRALRTHGLDVFTWSDAADQLRRRLALLHRELGAPWPEVSDAALLADLDGWL
SPELDALAGGTPAGRVDLASALRRLLPWPAAAQFDALAPERLEVPSGSRIRIAYPPVDDP
GARPVVAVKLQECFGWAQTPRLADGRVPVLFHLLSPAGRPLAVTDDLASFWSGPYAQVRA
EMRGRYPKHPWPEDPWQAAPTRHTKNRAARG
NT seq
1716 nt
NT seq
+upstream
nt +downstream
nt
gtgatccgtggccgccgcaccgatcagcctccgcgcatcatcgtcaccacctcgctggcg
gagtcctcgctcaccgtgccgggcgtgcgcctggtggtcgacagttgcctggcccggcat
ccgcagcgcgatgcgtcccgtggcatgagcggactggtgacctccgcggcatcccgctcc
tcctgcgtgcagcgggccgggcgtgccacccgccagggctcgggcacggtgatccgctgc
gtcgacgagcgcacctacgcggccgctcccgcacgtcccgcacccgagatcgccaccacc
gacctcaccgatgcggcgctgctgctggcctgctggggtgcaccgcaaggcaccgggctg
cggctgatcgacccgcttcccgccgacagcctggccgacgccgtcaccgtgctgaagagc
ctgggggccgtcgacgacgacgggcgggcgaccgacgacgggcgggctctggcacgcatc
cccaccgatccccgcctggcacgcgccctgcgcgatggcggcccgctggtcggctcacgt
ctcgccgccgaggtggtggcgctgctgggcggcgacctgcggctcacggatgccgacgtc
gccggcgccatcgtcgcgctgcggaatgggcgcaggccggatgccgggcgctgggctcgc
gatgtcacccggctccagcggcttgtcccctccgctccgggcatcggcgccggcaccgac
gcggtcggcctggtcatcgccctggcctacccggagcggatcgcgcgccgcatggagcgc
tcggcagacggggcgaggttcctcctggcatccggcactcgtgcgggagtgcgcggatcc
ctggcggatgccgggtggctggccgtcgccgatgtcgcacgagcatccggacgcgcagcg
gcgggctccggggcgatcatccgtgctgcggcggtgatctccgaggagcacctggagcag
gtggccggaccgttgatgacggatcgtgtggaagcgcagttcaccgatggtcgcgtgcag
gcgcgccgcgaacgccgcgtcggcgcgatcgtacgatcatcggggccggtgcgcgcgaca
gccgatgaggggcgggatgccgtgcgtcgcgctctgcggacgcacggactcgacgtcttc
acctggtcggatgcggcggatcagctgcgccgccggctggcgctgctgcaccgcgagctg
ggtgcgccgtggccggaggtgtcggatgctgcgctgctcgcggacctggacggctggctg
tcccccgagctcgatgccctcgccggtggcacaccggccggacgggtcgacctggcatcc
gctctgcgtcgactgctgccgtggccggcggcagcacaattcgacgcactggcaccggag
cggctcgaggtgcccagcggcagtcgcatccgcatcgcctacccgccggtcgacgacccg
ggtgcgcgtcccgtcgtcgctgtgaagctgcaggagtgcttcggctgggcgcagacgcca
cgcctcgcggacggccgggttcccgtgctgttccatctgctctcgccggctggtcgccca
ctcgcggtcaccgatgatctcgcctcgttctggtcggggccctatgcgcaggtgcgcgcc
gagatgcgcgggcgctatccgaagcatccgtggcccgaggatccgtggcaggccgctccc
acgcgccacacgaagaaccgtgccgcccggggctga
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