Microbacterium suwonense: GCM10025863_22610
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Entry
GCM10025863_22610 CDS
T09270
Symbol
ykoD
Name
(GenBank) putative HMP/thiamine import ATP-binding protein YkoD
KO
K01552
energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
Organism
msuw
Microbacterium suwonense
Brite
KEGG Orthology (KO) [BR:
msuw00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
msuw02000
]
GCM10025863_22610 (ykoD)
Transporters [BR:
msuw02000
]
ABC transporters, prokaryotic type
Metallic cation, iron-siderophore and vitamin B12 transporters
Energy-coupling factor transporter
GCM10025863_22610 (ykoD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
AAA_21
AAA_29
AAA_25
SMC_N
AAA_16
AAA_23
AAA_22
nSTAND1
ATP_bind_1
RsgA_GTPase
Mg_chelatase
AAA_15
AAA_27
AAA_28
ABC_ATPase
FtsK_SpoIIIE
SRP54
NACHT
DLIC
DO-GTPase2
Motif
Other DBs
NCBI-ProteinID:
BDZ39647
LinkDB
All DBs
Position
2176435..2178123
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AA seq
562 aa
AA seq
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MRSSAPLLRVRDLSLTHVGATHPSPEGVSFDIDLGEVVLVLGPSGSGKSTMTLALNGLIP
QAVPADLAGSVEVRGRDIADVPVAEVSSDVAMVFQDPDAQLVTGTLMDEVAFALENLLLP
VAEVLSRAERALRRVGLWDRRHWNPDRLSGGGRQRLAIACAIAMGSSVIVLDEPTANLDP
QGIDDVYDALAELVASGDHAVVLVEHNLDAAMRFATRTIVLDQRGRLVFDGPVDEILRGH
TEELIAMGVWLPAATLAGWMLRERGILPIDAPLPLTADELAAAIPLAQHGAAAPEPSPSQ
DPRSPASVIRVRNLTVKRGRSEVLHGIDLDIPAGSLTAIVGANGAGKTTLIQSLAGVVPP
PKGRVTIGDLDPGRASPRDLTARIGFVFQNPEHQFIAHTVFDELAHGLRLRGVSDADIAD
RVGEMLTRFGLEHKADVHPFLLSGGEKRRLSVGTALITRPGVLALDEPTFGQDRARADEL
LRLLGDLRTEGTTILIVTHDLQLVADHATHTVILADGRIHATGRTASLFATPGLFEGAGL
RLPALHRALDPVLRGVLAEAAR
NT seq
1689 nt
NT seq
+upstream
nt +downstream
nt
gtgcgttcatccgcccctctgcttcgcgtgcgtgatctctccctcacgcacgtcggcgcg
acgcatccgtcgcccgagggtgtcagcttcgacatcgacctgggcgaggtggtcctggtg
ctcgggccgagcggctcgggcaagtcgacgatgacgctggcgctgaacgggctcatcccg
caggcggttcccgccgacctcgccggcagcgtcgaggtgaggggccgcgacatcgcggat
gtcccggtggccgaggtcagctccgacgtggcgatggtcttccaggaccccgacgcgcag
ctcgtcaccggcacgctgatggacgaggtggccttcgctctcgagaacctgctgctcccc
gtcgccgaggtgctctcgcgggcggagcgcgcgctgcggcgcgtcggcctgtgggatcgt
cggcattggaaccccgaccggctctcgggcggcgggcgccagcggctcgcgatcgcctgc
gccatcgcgatgggctcgtcggtgatcgtgctcgacgagccgaccgccaacctcgatccg
cagggcatcgacgacgtctacgacgccctggccgagctggtcgcctccggcgatcacgcc
gtcgtcctcgtcgagcacaacctggatgccgcgatgcgcttcgccacccgcacgatcgtc
ctcgatcagcgcggccggctcgtgttcgacggccctgtcgacgagatactgcgcggacac
accgaggagctcatcgcgatgggcgtatggctcccggcggcgacactggcggggtggatg
ctgcgcgaacgcggaatcctgccgatcgatgctcccctgccgctgaccgctgacgaactg
gcggctgcgatcccgctcgcgcagcacggcgcagcggcacccgagccatcaccatcgcag
gacccgcgctccccggcatccgtgatccgtgttcggaacctcactgtgaagcgcggcagg
tcggaggtgctgcacggcatcgacctcgacatcccggccgggtcgctcaccgccatcgtc
ggcgcgaacggcgccggcaagaccacgctcatccagtcgctcgccggtgtcgtgccgcca
ccgaagggtcgggtgacgatcggcgatctcgaccccggtcgcgcctctccgcgtgatctc
accgctcgcatcggcttcgtgttccagaaccccgagcatcagttcatcgctcacaccgtc
ttcgacgagctcgcgcacgggttacggctgcgcggagtgtcggatgccgacatcgccgac
cgcgtgggcgagatgctcacccggttcggactcgagcacaaggccgacgtgcatccgttc
ctgctctccggaggtgagaagcgacgtctgtccgtgggtacggcgctcatcacccgtccc
ggcgtgctggcactcgacgagccgacattcggccaggatcgcgcccgcgccgacgagctg
ctgcggctgctcggcgacctgcggactgaggggacgacgatcctcatcgtcacgcatgat
ctgcagctggtcgccgaccatgcgacccacacggtcatcctcgccgacggccgcatccat
gcgaccggccggacggcgtcgctgttcgcgacaccgggtctgttcgagggcgcgggactg
cggcttcccgcgctgcaccgtgcgctggatcctgtgctgcgcggcgtcctcgccgaggcg
gcgcgatga
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